Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS13180 and RR42_RS13185 overlap by 4 nucleotidesRR42_RS13185 and RR42_RS13190 are separated by 6 nucleotidesRR42_RS13190 and RR42_RS13195 are separated by 8 nucleotidesRR42_RS13195 and RR42_RS13200 are separated by 28 nucleotides RR42_RS13180: RR42_RS13180 - 3'-5' exonuclease, at 2,839,845 to 2,840,693 _RS13180 RR42_RS13185: RR42_RS13185 - RNA polymerase sigma factor RpoS, at 2,840,690 to 2,841,868 _RS13185 RR42_RS13190: RR42_RS13190 - outer membrane metallopeptidase lipoprotein nlpD, at 2,841,875 to 2,842,729 _RS13190 RR42_RS13195: RR42_RS13195 - protein-L-isoaspartate O-methyltransferase, at 2,842,738 to 2,843,634 _RS13195 RR42_RS13200: RR42_RS13200 - stationary phase survival protein SurE, at 2,843,663 to 2,844,415 _RS13200
Group Condition RR42_RS13180 RR42_RS13185 RR42_RS13190 RR42_RS13195 RR42_RS13200
stress R2A with nitrate 200 mM -0.8 -0.3 -1.6 -1.8 -1.4
stress R2A with Nickel (II) chloride 0.35 mM -0.5 -0.6 -1.5 -1.7 -0.3
nitrogen source casaminos (N) -0.7 -1.2 -0.6 -1.4 -0.6
stress R2A with Dimethyl Sulfoxide 5 vol% -0.6 -0.5 -0.7 -1.1 -1.4
temperature R2A 23C -0.7 -0.8 -1.2 -0.6 -0.5
stress R2A with Vancomycin 0.5 mg/ml -0.3 +0.1 -1.7 -1.4 -0.5
nitrogen source L-Glutamine (N) -0.8 -1.1 -0.9 -0.7 +0.1
nitrogen source L-Serine (N) -0.5 -0.6 -0.6 -1.1 -0.5
nitrogen source D-Alanine (N) -0.3 -0.2 -0.9 -1.5 -0.3
stress R2A with Zinc 0.1 mM -0.9 -0.5 -0.6 -0.9 -0.4
nitrogen source L-Leucine (N) -0.6 -0.4 -0.6 -1.0 -0.7
stress R2A with Polymyxin B sulfate 0.005 mg/ml +0.3 +0.3 -1.1 -1.8 -0.9
stress R2A with Cephalothin 0.25 mg/ml -0.4 -0.6 -0.8 -0.8 -0.6
nitrogen source L-Isoleucine (N) -0.5 -0.3 -0.7 -1.2 -0.4
nitrogen source Glucuronamide (N) -0.6 -0.8 +0.1 -1.1 -0.6
nitrogen source L-Lysine (N) -0.3 -0.3 -1.3 -0.8 -0.2
carbon source Pimelic (C) -0.7 +0.8 -0.6 -2.0 -0.4
carbon source Pimelic (C) -0.4 +1.0 -0.8 -1.8 -0.3
stress R2A with Chloride 300 mM -0.5 +0.4 -1.3 -0.5 -0.3
carbon source adipate (C) -0.6 +0.9 -0.2 -1.6 -0.4
carbon source adipate (C) -0.4 +0.7 -0.3 -1.5 -0.3
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.6 +1.5 +0.8 -0.6 -0.3
stress R2A with Lomefloxacin 0.00075 mM +1.9 +0.7 +0.3 -0.9 -0.6
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.0 +1.3 +1.4 -0.2 +0.5
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.1 +1.6 +1.9 -0.3 +0.6
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.2 +2.2 +1.8 -0.3 +0.3
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.2 +2.5 +1.3 +0.1 +0.2
stress R2A with Nickel (II) chloride 0.5 mM +1.0 +1.0 +0.5 +0.3 +1.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.2 +2.1 +1.8 -0.1 +0.5
stress R2A with Lomefloxacin 0.001 mM +5.8 +3.1 +3.1 -0.9 +0.3
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