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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS12935 and RR42_RS12940 are separated by 97 nucleotides
RR42_RS12940 and RR42_RS12945 are separated by 489 nucleotides
RR42_RS12945 and RR42_RS12950 are separated by 28 nucleotides
RR42_RS12950 and RR42_RS12955 are separated by 1 nucleotides
RR42_RS12935: RR42_RS12935 - dihydrolipoamide succinyltransferase, at 2,780,974 to 2,782,221
_RS12935
RR42_RS12940: RR42_RS12940 - 2-oxoglutarate dehydrogenase, at 2,782,319 to 2,785,174
_RS12940
RR42_RS12945: RR42_RS12945 - membrane protein, at 2,785,664 to 2,787,259
_RS12945
RR42_RS12950: RR42_RS12950 - membrane protein, at 2,787,288 to 2,788,034
_RS12950
RR42_RS12955: RR42_RS12955 - glycerol-3-phosphate ABC transporter ATP-binding protein, at 2,788,036 to 2,789,139
_RS12955
Group
Condition
RR42
_RS12935
RR42
_RS12940
RR42
_RS12945
RR42
_RS12950
RR42
_RS12955
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
N.D.
N.D.
-0.2
-0.4
-0.8
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
N.D.
-0.1
-1.4
+0.4
carbon source
propionate (C)
N.D.
N.D.
-0.3
-0.6
-0.1
stress
R2A with copper (II) chloride 0.25 mM
N.D.
N.D.
-0.4
-0.4
-0.1
carbon source
L-Glutamine (C)
N.D.
N.D.
-0.3
-0.3
-0.2
carbon source
L-Proline (C)
N.D.
N.D.
-0.5
-0.2
-0.1
stress
R2A with Zinc 0.1 mM
N.D.
N.D.
+0.3
-0.2
-0.7
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
N.D.
N.D.
-0.2
-0.4
+0.2
nitrogen source
casaminos (N)
N.D.
N.D.
+0.3
-0.5
-0.2
stress
R2A with Nickel (II) chloride 0.25 mM
N.D.
N.D.
+0.3
-0.5
-0.1
carbon source
Suberic (C)
N.D.
N.D.
-0.4
+0.4
-0.2
carbon source
D,L-Lactate (C)
N.D.
N.D.
-0.5
+0.2
+0.1
carbon source
Valeric (C)
N.D.
N.D.
-0.5
+0.2
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
N.D.
-0.4
+0.7
-0.4
carbon source
Protocatechuic Acid (C)
N.D.
N.D.
-0.5
+0.1
+0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
N.D.
-0.6
+0.8
-0.2
carbon source
Suberic (C)
N.D.
N.D.
-0.5
+0.4
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
N.D.
-0.2
+0.6
-0.3
lb
LB
N.D.
N.D.
-0.4
+0.6
-0.0
stress
R2A with Cephalothin 0.25 mg/ml
N.D.
N.D.
+0.1
+0.5
-0.2
stress
R2A with Cobalt chloride 0.5 mM
N.D.
N.D.
-0.3
+0.4
+0.5
stress
R2A with Nickel (II) chloride 0.5 mM
N.D.
N.D.
+0.5
-0.4
+0.6
carbon source
Octanoic (C)
N.D.
N.D.
-0.1
+0.6
+0.2
stress
R2A with Cobalt chloride 0.3 mM
N.D.
N.D.
+0.6
+0.2
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
N.D.
N.D.
+0.2
+0.7
-0.1
carbon source
adipate (C)
N.D.
N.D.
+0.4
+0.2
+0.2
stress
R2A with Nickel (II) chloride 0.35 mM
N.D.
N.D.
+0.4
+0.0
+0.4
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
N.D.
+0.4
+0.2
+0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
N.D.
N.D.
+0.3
+0.3
+0.3
stress
R2A with Bacitracin 0.5 mg/ml
N.D.
N.D.
+0.3
+0.7
+0.1
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