Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS12860 and RR42_RS12865 are separated by 5 nucleotidesRR42_RS12865 and RR42_RS12870 are separated by 591 nucleotidesRR42_RS12870 and RR42_RS12875 are separated by 298 nucleotidesRR42_RS12875 and RR42_RS12880 are separated by 86 nucleotides RR42_RS12860: RR42_RS12860 - pseudouridine synthase, at 2,764,268 to 2,766,184 _RS12860 RR42_RS12865: RR42_RS12865 - SMC-Scp complex subunit ScpB, at 2,766,190 to 2,767,266 _RS12865 RR42_RS12870: RR42_RS12870 - membrane protein, at 2,767,858 to 2,768,622 _RS12870 RR42_RS12875: RR42_RS12875 - transcriptional regulator, at 2,768,921 to 2,769,646 _RS12875 RR42_RS12880: RR42_RS12880 - membrane protein, at 2,769,733 to 2,769,978 _RS12880
Group Condition RR42_RS12860 RR42_RS12865 RR42_RS12870 RR42_RS12875 RR42_RS12880
stress R2A with Nickel (II) chloride 0.35 mM -1.8 N.D. +0.2 -2.7 +0.0
nitrogen source L-Lysine (N) -1.5 N.D. -1.3 -0.4 -0.4
carbon source L-Histidine (C) -1.7 N.D. -0.4 -1.0 -0.4
carbon source Azelaic (C) -2.2 N.D. +0.1 -1.3 +0.1
stress R2A with Cobalt chloride 0.3 mM -1.9 N.D. -0.3 -0.9 -0.0
carbon source Protocatechuic Acid (C) -2.1 N.D. +0.3 -0.9 +0.1
lb LB -3.0 N.D. +0.3 +0.9 -0.8
nitrogen source nitrite (N) -2.1 N.D. -0.6 +0.2 -0.1
nitrogen source L-Citrulline (N) -1.1 N.D. -1.3 +0.2 -0.2
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.4 N.D. +0.1 -1.7 -0.4
carbon source succinate (C) -0.7 N.D. -0.3 -1.1 -0.3
nitrogen source L-Leucine (N) -1.3 N.D. +0.2 -0.8 -0.3
stress R2A with Nickel (II) chloride 0.5 mM -1.9 N.D. +0.2 -0.6 +0.2
stress R2A with Cobalt chloride 0.5 mM -0.4 N.D. +0.6 -1.2 -1.0
carbon source L-Leucine (C) -1.8 N.D. +0.4 -0.9 +0.4
stress R2A with Chloride 300 mM -0.8 N.D. +0.4 -0.9 -0.4
carbon source Heptanoic (C) -1.0 N.D. +0.4 -1.1 +0.0
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.6 N.D. -0.9 +0.7 -0.8
carbon source L-Proline (C) -1.5 N.D. -1.1 -0.1 +1.2
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.7 N.D. -1.4 +0.9 -0.2
carbon source Heptanoic (C) -1.3 N.D. -0.6 +0.3 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -1.9 N.D. +0.5 +0.2 +0.1
carbon source Ethanol (C) -1.6 N.D. +0.1 -0.2 +0.8
carbon source Protocatechuic Acid (C) -1.2 N.D. +1.0 +0.4 +0.4
nitrogen source L-Tryptophan (N) -0.9 N.D. +0.5 +0.2 +1.0
stress R2A with Lomefloxacin 0.00075 mM +1.3 N.D. +0.5 +0.2 -1.1
stress R2A with sodium fluoride 100 mM +1.1 N.D. +0.6 +0.0 -0.6
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.2 N.D. +0.7 +2.1 -0.4
stress R2A with Lomefloxacin 0.001 mM +2.3 N.D. +0.5 -0.1 +1.1
stress R2A with Polymyxin B sulfate 0.005 mg/ml +5.0 N.D. -0.0 -0.1 -0.1
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