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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS12755 and RR42_RS12760 are separated by 377 nucleotides
RR42_RS12760 and RR42_RS12765 are separated by 18 nucleotides
RR42_RS12765 and RR42_RS12770 are separated by 433 nucleotides
RR42_RS12770 and RR42_RS12775 are separated by 58 nucleotides
RR42_RS12755: RR42_RS12755 - ATPase, at 2,738,748 to 2,739,173
_RS12755
RR42_RS12760: RR42_RS12760 - hypothetical protein, at 2,739,551 to 2,741,596
_RS12760
RR42_RS12765: RR42_RS12765 - protein kinase, at 2,741,615 to 2,743,696
_RS12765
RR42_RS12770: RR42_RS12770 - hypothetical protein, at 2,744,130 to 2,744,387
_RS12770
RR42_RS12775: RR42_RS12775 - hypothetical protein, at 2,744,446 to 2,744,703
_RS12775
Group
Condition
RR42
_RS12755
RR42
_RS12760
RR42
_RS12765
RR42
_RS12770
RR42
_RS12775
nitrogen source
casaminos (N)
N.D.
-0.6
-0.9
N.D.
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
-0.9
-0.5
N.D.
N.D.
temperature
R2A 23C
N.D.
-0.7
-0.5
N.D.
N.D.
r2a
R2A
N.D.
-0.7
-0.6
N.D.
N.D.
stress
R2A with Lomefloxacin 0.00075 mM
N.D.
-0.7
-0.5
N.D.
N.D.
nitrogen source
L-Serine (N)
N.D.
-0.7
-0.5
N.D.
N.D.
nitrogen source
Glucuronamide (N)
N.D.
-0.6
-0.5
N.D.
N.D.
stress
R2A with Dimethyl Sulfoxide 5 vol%
N.D.
-0.5
-0.6
N.D.
N.D.
stress
R2A with Cephalothin 0.25 mg/ml
N.D.
-0.7
-0.4
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
N.D.
-0.7
-0.4
N.D.
N.D.
temperature
R2A 23C
N.D.
-0.4
-0.6
N.D.
N.D.
stress
R2A with Zinc 0.1 mM
N.D.
-0.5
-0.5
N.D.
N.D.
stress
R2A with nitrate 200 mM
N.D.
-0.5
-0.4
N.D.
N.D.
nitrogen source
L-Leucine (N)
N.D.
-0.4
-0.4
N.D.
N.D.
nitrogen source
L-Glutamine (N)
N.D.
-0.3
-0.3
N.D.
N.D.
nitrogen source
L-Phenylalanine (N)
N.D.
-0.4
-0.2
N.D.
N.D.
stress
R2A with Paraquat dichloride 0.064 mg/ml
N.D.
-0.3
-0.3
N.D.
N.D.
carbon source
D-Lactate (C)
N.D.
+0.3
+0.2
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.25 mM
N.D.
+0.5
+0.2
N.D.
N.D.
stress
R2A with Cobalt chloride 0.3 mM
N.D.
+0.4
+0.3
N.D.
N.D.
stress
R2A with nitrate 150 mM
N.D.
+0.5
+0.2
N.D.
N.D.
stress
R2A with nitrate 200 mM
N.D.
+0.5
+0.3
N.D.
N.D.
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
N.D.
+0.5
+0.4
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
N.D.
+0.5
+0.4
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.5 mM
N.D.
+0.4
+0.5
N.D.
N.D.
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
N.D.
+0.5
+0.4
N.D.
N.D.
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
N.D.
+0.5
+0.4
N.D.
N.D.
r2a
R2A
N.D.
+0.6
+0.4
N.D.
N.D.
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
N.D.
+0.5
+0.6
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.25 mM
N.D.
+0.6
+0.6
N.D.
N.D.
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RR42_RS12765
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