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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS12445 and RR42_RS12450 are separated by 109 nucleotides
RR42_RS12450 and RR42_RS12455 are separated by 209 nucleotides
RR42_RS12455 and RR42_RS12460 are separated by 196 nucleotides
RR42_RS12460 and RR42_RS12465 overlap by 1 nucleotides
RR42_RS12445: RR42_RS12445 - hypothetical protein, at 2,674,723 to 2,675,238
_RS12445
RR42_RS12450: RR42_RS12450 - hypothetical protein, at 2,675,348 to 2,675,716
_RS12450
RR42_RS12455: RR42_RS12455 - protein disaggregation chaperone, at 2,675,926 to 2,678,514
_RS12455
RR42_RS12460: RR42_RS12460 - oxidoreductase, at 2,678,711 to 2,679,640
_RS12460
RR42_RS12465: RR42_RS12465 - cytochrome C1, at 2,679,640 to 2,681,838
_RS12465
Group
Condition
RR42
_RS12445
RR42
_RS12450
RR42
_RS12455
RR42
_RS12460
RR42
_RS12465
stress
R2A with nitrate 150 mM
N.D.
-0.3
-0.5
-0.3
-0.3
lb
LB
N.D.
+0.2
-1.0
-0.3
-0.0
stress
R2A with Nickel (II) chloride 0.25 mM
N.D.
-0.8
-0.4
+0.2
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
N.D.
-0.1
-0.4
-0.4
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
+0.3
-0.5
-0.1
-0.3
stress
R2A with Cobalt chloride 0.3 mM
N.D.
-0.6
-0.3
+0.4
-0.1
carbon source
adipate (C)
N.D.
+0.2
+0.2
-0.7
-0.3
temperature
R2A 37C
N.D.
+0.4
-0.8
+0.1
-0.1
stress
R2A with Lomefloxacin 0.001 mM
N.D.
-0.3
+0.4
+0.0
-0.4
stress
R2A with D-Cycloserine 0.5 mg/ml
N.D.
-0.4
+0.2
+0.2
-0.3
stress
R2A with Cisplatin 0.001 mg/ml
N.D.
-0.9
+0.3
+0.1
+0.2
stress
R2A with Sisomicin 0.035 mg/ml
N.D.
-0.6
+0.6
-0.0
-0.1
carbon source
Octanoic (C)
N.D.
-0.1
-0.4
+0.3
+0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
+0.5
+0.3
-0.3
-0.3
nitrogen source
L-Glutamine (N)
N.D.
+0.4
-0.4
+0.0
+0.1
carbon source
Disodium Glutarate (C)
N.D.
+0.4
+0.2
-0.4
-0.0
stress
R2A with Cobalt chloride 0.5 mM
N.D.
-0.6
+0.4
+0.7
-0.1
carbon source
Heptanoic (C)
N.D.
+0.5
-0.2
+0.2
+0.0
nitrogen source
casaminos (N)
N.D.
+0.3
+0.3
-0.1
+0.2
carbon source
L-Tryptophan (C)
N.D.
+0.7
+0.1
-0.2
+0.2
temperature
R2A 23C
N.D.
+0.5
+0.3
+0.2
-0.0
r2a
R2A
N.D.
+0.3
+0.3
+0.3
+0.1
r2a
R2A
N.D.
+0.5
+0.2
+0.3
+0.0
carbon source
Dodecandioic (C)
N.D.
+0.5
+0.0
+0.4
+0.2
stress
R2A with nitrate 200 mM
N.D.
+0.3
+0.3
+0.5
+0.0
stress
R2A with Cephalothin 0.25 mg/ml
N.D.
+0.5
+0.2
+0.3
+0.2
stress
R2A with Zinc 0.1 mM
N.D.
+0.4
+0.4
+0.3
+0.0
carbon source
D,L-Lactate (C)
N.D.
+0.5
+0.4
+0.2
+0.2
carbon source
propionate (C)
N.D.
+0.5
+0.3
+0.3
+0.1
stress
R2A with copper (II) chloride 0.25 mM
N.D.
+0.2
+0.5
+0.5
+0.1
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RR42_RS12455
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RR42_RS12465
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