Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntRR42_RS12410 and RR42_RS12415 are separated by 252 nucleotidesRR42_RS12415 and RR42_RS12420 are separated by 69 nucleotidesRR42_RS12420 and RR42_RS12425 overlap by 11 nucleotidesRR42_RS12425 and RR42_RS12430 are separated by 286 nucleotides RR42_RS12410: RR42_RS12410 - serine hydrolase, at 2,664,226 to 2,665,482 _RS12410 RR42_RS12415: RR42_RS12415 - ABC transporter substrate-binding protein, at 2,665,735 to 2,666,724 _RS12415 RR42_RS12420: RR42_RS12420 - CoA-transferase, at 2,666,794 to 2,667,948 _RS12420 RR42_RS12425: RR42_RS12425 - 3-hydroxy-3-methylglutaryl-CoA lyase, at 2,667,938 to 2,668,918 _RS12425 RR42_RS12430: RR42_RS12430 - LysR family transcriptional regulator, at 2,669,205 to 2,670,107 _RS12430
Group Condition RR42_RS12410 RR42_RS12415 RR42_RS12420 RR42_RS12425 RR42_RS12430
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL -0.2 -0.1 -0.2 -1.2 -1.6
stress R2A with Lomefloxacin 0.001 mM -0.2 -0.2 +0.4 -0.0 -2.1
carbon source Pimelic (C) +0.1 -0.1 +0.0 -0.5 -1.6
carbon source Protocatechuic Acid (C) +0.0 -0.3 +0.2 -0.2 -1.7
carbon source succinate (C) +0.0 +0.0 -0.3 -0.2 -1.1
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.3 +0.1 -0.1 -1.0 -0.6
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.0 -0.0 +0.2 +0.3 -1.8
carbon source adipate (C) +0.2 +0.2 +0.0 -0.2 -1.4
carbon source Azelaic (C) +0.1 -0.2 -0.2 -0.1 -0.6
carbon source Heptanoic (C) +0.1 -0.0 -0.1 -0.2 -0.9
stress R2A with Cisplatin 0.001 mg/ml -0.3 +0.1 +0.1 +0.1 -0.9
stress R2A with copper (II) chloride 0.25 mM +0.2 +0.3 -0.2 -0.3 -0.9
stress R2A with Nickel (II) chloride 0.35 mM +0.2 -0.0 +0.1 -0.5 -0.6
stress R2A with Zinc 0.1 mM +0.4 +0.1 -0.1 -0.3 -0.8
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.2 -0.3 -0.2 -0.6 +0.2
carbon source Suberic (C) +0.2 +0.1 +0.2 -0.8 -0.4
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.1 -0.3 +0.0 +0.4 -0.7
nitrogen source L-Glutamine (N) +0.3 +0.3 -0.2 -0.3 -0.6
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.1 +0.4 -0.5 -0.3 +0.1
stress R2A with Sisomicin 0.035 mg/ml +0.2 +0.2 -0.3 -0.4 +0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.0 +0.3 +0.2 +0.2 -0.7
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.0 -0.1 +0.0 -0.4 +0.9
stress R2A with Chlorite 4 mM +0.2 +0.2 -0.2 -0.2 +0.7
r2a R2A +0.1 -0.4 +0.3 +0.4 +0.7
temperature R2A 23C +0.1 +0.2 -0.0 +0.5 +0.4
nitrogen source Glucuronamide (N) +0.1 +0.1 -0.1 +0.6 +0.5
carbon source D-Gluconic Acid (C) +0.1 +0.1 +0.2 +0.3 +0.5
carbon source L-Histidine (C) +0.2 +0.3 -0.2 +0.7 +0.2
carbon source D,L-Lactate (C) +0.3 +0.4 -0.0 -0.1 +0.8
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.1 -0.3 +0.1 +0.9 +0.8
remove
RR42_RS12410
plot		 remove
RR42_RS12415
plot		 remove
RR42_RS12420		 remove
RR42_RS12425
plot		 remove
RR42_RS12430
plot