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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS12080 and RR42_RS12085 are separated by 152 nucleotides
RR42_RS12085 and RR42_RS12090 are separated by 165 nucleotides
RR42_RS12090 and RR42_RS12095 are separated by 12 nucleotides
RR42_RS12095 and RR42_RS12100 overlap by 4 nucleotides
RR42_RS12080: RR42_RS12080 - lipase, at 2,588,585 to 2,589,301
_RS12080
RR42_RS12085: RR42_RS12085 - glyoxalase, at 2,589,454 to 2,589,897
_RS12085
RR42_RS12090: RR42_RS12090 - monooxygenase, at 2,590,063 to 2,591,250
_RS12090
RR42_RS12095: RR42_RS12095 - monooxygenase, at 2,591,263 to 2,592,510
_RS12095
RR42_RS12100: RR42_RS12100 - monooxygenase, at 2,592,507 to 2,593,859
_RS12100
Group
Condition
RR42
_RS12080
RR42
_RS12085
RR42
_RS12090
RR42
_RS12095
RR42
_RS12100
lb
LB
-0.8
-0.2
-2.0
-0.5
-0.5
stress
R2A with Cisplatin 0.001 mg/ml
-0.0
-1.4
+0.2
-0.5
-0.3
temperature
R2A 37C
+0.0
-0.7
-0.6
-0.3
-0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-1.3
-0.9
+0.2
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.2
-0.2
-0.9
-0.0
-0.5
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.6
-0.6
+0.4
-0.3
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.7
-0.2
-0.7
-0.2
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
-0.2
-0.8
+0.4
+0.4
carbon source
adipate (C)
-0.0
+1.0
-0.3
-0.1
-0.4
carbon source
D-Fructose (C)
-0.5
+0.7
+0.3
-0.3
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.3
-0.2
+0.3
+0.6
carbon source
L-Tryptophan (C)
-0.4
+0.5
+0.5
-0.1
-0.2
carbon source
Valeric (C)
-0.3
+0.8
+0.1
-0.4
+0.1
stress
R2A with A22 0.01 mg/ml
+0.3
+0.6
+0.1
-0.2
-0.4
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
-0.5
+0.8
+0.2
-0.2
+0.1
carbon source
butyrate (C)
-0.2
+0.7
+0.4
-0.3
-0.1
stress
R2A with Cobalt chloride 0.5 mM
-0.1
-0.5
+0.5
+0.3
+0.3
carbon source
Azelaic (C)
-0.4
+1.8
-0.2
-0.4
-0.3
nitrogen source
L-Lysine (N)
+0.2
+0.6
+0.4
-0.3
-0.2
nitrogen source
L-Leucine (N)
+0.8
+0.6
+0.2
-0.2
-0.5
nitrogen source
nitrate (N)
+0.4
-0.1
+0.4
+0.6
-0.3
carbon source
L-Asparagine (C)
+0.2
+0.3
+0.2
+0.6
-0.3
nitrogen source
Glucuronamide (N)
+0.7
+0.6
+0.2
-0.3
-0.0
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.4
+1.0
+0.1
-0.1
-0.1
nitrogen source
L-Valine (N)
+0.7
+0.4
+0.4
+0.1
-0.2
nitrogen source
L-Phenylalanine (N)
+0.4
+0.6
+0.5
+0.2
-0.2
nitrogen source
L-Citrulline (N)
+0.6
+0.6
+0.1
+0.2
-0.0
stress
R2A with Lomefloxacin 0.001 mM
-0.3
+1.6
-0.2
+0.4
+0.2
nitrogen source
L-Isoleucine (N)
+0.3
+1.4
+0.2
-0.2
-0.1
carbon source
Protocatechuic Acid (C)
+0.3
+1.7
+0.3
-0.4
+0.3
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