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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS11740 and RR42_RS11745 overlap by 26 nucleotides
RR42_RS11745 and RR42_RS11750 are separated by 141 nucleotides
RR42_RS11750 and RR42_RS11755 are separated by 123 nucleotides
RR42_RS11755 and RR42_RS11760 are separated by 118 nucleotides
RR42_RS11740: RR42_RS11740 - GMP synthase, at 2,511,035 to 2,512,654
_RS11740
RR42_RS11745: RR42_RS11745 - membrane protein, at 2,512,629 to 2,513,231
_RS11745
RR42_RS11750: RR42_RS11750 - inosine-5-monophosphate dehydrogenase, at 2,513,373 to 2,514,836
_RS11750
RR42_RS11755: RR42_RS11755 - multidrug DMT transporter permease, at 2,514,960 to 2,515,928
_RS11755
RR42_RS11760: RR42_RS11760 - hypothetical protein, at 2,516,047 to 2,516,628
_RS11760
Group
Condition
RR42
_RS11740
RR42
_RS11745
RR42
_RS11750
RR42
_RS11755
RR42
_RS11760
stress
R2A with Thallium(I) acetate 0.001 mg/ml
N.D.
-0.2
N.D.
-0.3
-0.4
carbon source
Protocatechuic Acid (C)
N.D.
-0.5
N.D.
-0.4
+0.0
carbon source
Octanoic (C)
N.D.
-0.4
N.D.
-0.1
-0.3
stress
R2A with Cephalothin 0.25 mg/ml
N.D.
-0.2
N.D.
-0.1
-0.6
carbon source
Valeric (C)
N.D.
-0.1
N.D.
-0.1
-0.6
nitrogen source
L-Isoleucine (N)
N.D.
-0.4
N.D.
-0.2
-0.1
carbon source
Hexanoic (C)
N.D.
-0.5
N.D.
-0.2
-0.1
stress
R2A with Chloride 300 mM
N.D.
+0.2
N.D.
-0.4
-0.5
carbon source
L-Proline (C)
N.D.
+0.1
N.D.
-0.0
-0.6
stress
R2A with Nickel (II) chloride 0.5 mM
N.D.
-0.9
N.D.
-0.0
+0.3
carbon source
Azelaic (C)
N.D.
-0.4
N.D.
-0.3
+0.2
stress
R2A with Paraquat dichloride 0.064 mg/ml
N.D.
-0.1
N.D.
-0.4
+0.1
carbon source
Protocatechuic Acid (C)
N.D.
-0.1
N.D.
-0.4
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
-0.1
N.D.
-0.5
+0.2
carbon source
L-Histidine (C)
N.D.
+0.2
N.D.
-0.2
-0.3
stress
R2A with Lomefloxacin 0.00075 mM
N.D.
+0.1
N.D.
-0.5
+0.1
stress
R2A with Bacitracin 0.5 mg/ml
N.D.
+0.2
N.D.
-0.3
-0.2
stress
R2A with Zinc 0.1 mM
N.D.
+0.1
N.D.
+0.2
-0.6
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
-0.1
N.D.
-0.4
+0.5
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
+0.3
N.D.
-0.0
-0.3
carbon source
adipate (C)
N.D.
-0.3
N.D.
-0.0
+0.4
carbon source
Heptanoic (C)
N.D.
-0.4
N.D.
+0.1
+0.3
lb
LB
N.D.
+0.1
N.D.
-0.4
+0.3
stress
R2A with Sisomicin 0.035 mg/ml
N.D.
+0.4
N.D.
-0.2
+0.0
nitrogen source
L-Valine (N)
N.D.
+0.2
N.D.
-0.2
+0.3
stress
R2A with nitrate 200 mM
N.D.
+0.6
N.D.
-0.0
-0.1
carbon source
L-Glutamine (C)
N.D.
+0.5
N.D.
-0.2
+0.1
r2a
R2A
N.D.
+0.5
N.D.
+0.3
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
+0.1
N.D.
-0.1
+0.7
stress
R2A with Cisplatin 0.001 mg/ml
N.D.
+0.1
N.D.
+0.6
+0.2
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