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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS11535 and RR42_RS11540 are separated by 222 nucleotides
RR42_RS11540 and RR42_RS11545 are separated by 194 nucleotides
RR42_RS11545 and RR42_RS11550 are separated by 89 nucleotides
RR42_RS11550 and RR42_RS11555 are separated by 151 nucleotides
RR42_RS11535: RR42_RS11535 - hypothetical protein, at 2,465,946 to 2,467,307
_RS11535
RR42_RS11540: RR42_RS11540 - TonB-dependent receptor, at 2,467,530 to 2,469,917
_RS11540
RR42_RS11545: RR42_RS11545 - 4-oxalocrotonate tautomerase, at 2,470,112 to 2,470,348
_RS11545
RR42_RS11550: RR42_RS11550 - 3-oxoacyl-ACP reductase, at 2,470,438 to 2,471,172
_RS11550
RR42_RS11555: RR42_RS11555 - LysR family transcriptional regulator, at 2,471,324 to 2,472,247
_RS11555
Group
Condition
RR42
_RS11535
RR42
_RS11540
RR42
_RS11545
RR42
_RS11550
RR42
_RS11555
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.3
-0.7
N.D.
-0.9
-0.7
stress
R2A with Cisplatin 0.001 mg/ml
-0.2
-0.2
N.D.
-1.0
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.3
-0.5
N.D.
-1.2
+0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
-0.6
N.D.
-0.8
+0.0
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.0
+0.0
N.D.
-1.1
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
+0.1
N.D.
-0.8
-0.3
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.1
-0.2
N.D.
-1.1
-0.1
carbon source
a-Ketoglutaric (C)
+0.0
-0.1
N.D.
-0.9
-0.2
carbon source
propionate (C)
-0.1
-0.0
N.D.
-0.8
-0.2
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
+0.1
N.D.
-1.0
-0.1
carbon source
pyruvate (C)
-0.2
+0.1
N.D.
-0.6
-0.4
carbon source
L-Lactate (C)
-0.2
-0.1
N.D.
-0.7
-0.2
carbon source
D-Lactate (C)
+0.2
-0.0
N.D.
-1.2
-0.0
stress
R2A with Zinc 0.1 mM
-0.2
-0.0
N.D.
-0.6
-0.2
carbon source
succinate (C)
-0.0
-0.0
N.D.
-0.8
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.3
+0.1
N.D.
-0.5
-0.3
carbon source
Valeric (C)
-0.2
-0.0
N.D.
-0.8
+0.0
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.1
+0.0
N.D.
-0.9
+0.1
carbon source
L-Asparagine (C)
+0.1
-0.1
N.D.
-0.7
-0.2
lb
LB
+0.3
+0.1
N.D.
-0.5
-0.6
carbon source
L-Alanine (C)
+0.1
-0.1
N.D.
-0.7
+0.2
stress
R2A with Bacitracin 0.5 mg/ml
-0.1
-0.1
N.D.
-0.7
+0.4
stress
R2A with Nickel (II) chloride 0.25 mM
+0.2
+0.1
N.D.
-0.3
-0.4
carbon source
Heptanoic (C)
+0.0
+0.1
N.D.
-0.6
+0.4
stress
R2A with Lomefloxacin 0.001 mM
-0.0
+0.2
N.D.
-0.7
+0.5
carbon source
a-Ketoglutaric (C)
+0.2
-0.0
N.D.
-0.4
+0.5
carbon source
L-Leucine (C)
-0.1
-0.0
N.D.
+0.5
+0.3
nitrogen source
D-Alanine (N)
+0.0
-0.2
N.D.
+0.6
+0.2
carbon source
L-Tryptophan (C)
-0.0
-0.1
N.D.
+0.7
+0.2
carbon source
D-Fructose (C)
+0.3
-0.1
N.D.
+0.4
+0.3
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