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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS11375 and RR42_RS11380 are separated by 113 nucleotides
RR42_RS11380 and RR42_RS11385 are separated by 76 nucleotides
RR42_RS11385 and RR42_RS11390 are separated by 67 nucleotides
RR42_RS11390 and RR42_RS11395 are separated by 250 nucleotides
RR42_RS11375: RR42_RS11375 - peptidase S66, at 2,436,600 to 2,437,574
_RS11375
RR42_RS11380: RR42_RS11380 - hypothetical protein, at 2,437,688 to 2,438,197
_RS11380
RR42_RS11385: RR42_RS11385 - 6-carboxy-5,6,7,8-tetrahydropterin synthase, at 2,438,274 to 2,438,750
_RS11385
RR42_RS11390: RR42_RS11390 - 7-cyano-7-deazaguanine reductase, at 2,438,818 to 2,439,465
_RS11390
RR42_RS11395: RR42_RS11395 - LysR family transcriptional regulator, at 2,439,716 to 2,440,621
_RS11395
Group
Condition
RR42
_RS11375
RR42
_RS11380
RR42
_RS11385
RR42
_RS11390
RR42
_RS11395
stress
R2A with D-Cycloserine 0.5 mg/ml
N.D.
N.D.
N.D.
N.D.
-0.8
carbon source
L-Malic (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
Suberic (C)
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
adipate (C)
N.D.
N.D.
N.D.
N.D.
-0.6
nitrogen source
L-Lysine (N)
N.D.
N.D.
N.D.
N.D.
-0.6
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
N.D.
N.D.
N.D.
N.D.
-0.6
stress
R2A with nitrate 150 mM
N.D.
N.D.
N.D.
N.D.
-0.5
carbon source
L-Alanine (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
Disodium Glutarate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
L-Alanine (C)
N.D.
N.D.
N.D.
N.D.
-0.4
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
R2A with Chloride 300 mM
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
Valeric (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
Dodecandioic (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
Pimelic (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D-Fructose (C)
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
propionate (C)
N.D.
N.D.
N.D.
N.D.
-0.4
stress
R2A with nitrate 200 mM
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
N.D.
N.D.
N.D.
-0.4
stress
R2A with Nickel (II) chloride 0.35 mM
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.3
stress
R2A with sodium fluoride 100 mM
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Heptanoic (C)
N.D.
N.D.
N.D.
N.D.
-0.3
temperature
R2A 23C
N.D.
N.D.
N.D.
N.D.
+0.3
nitrogen source
D-Alanine (N)
N.D.
N.D.
N.D.
N.D.
+0.4
nitrogen source
Glycine (N)
N.D.
N.D.
N.D.
N.D.
+0.4
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
N.D.
N.D.
N.D.
N.D.
+0.4
stress
R2A with Cobalt chloride 0.5 mM
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
propionate (C)
N.D.
N.D.
N.D.
N.D.
+0.5
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