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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS11155 and RR42_RS11160 are separated by 421 nucleotides
RR42_RS11160 and RR42_RS11165 are separated by 137 nucleotides
RR42_RS11165 and RR42_RS11170 are separated by 70 nucleotides
RR42_RS11170 and RR42_RS11175 are separated by 84 nucleotides
RR42_RS11155: RR42_RS11155 - long-chain fatty acid--CoA ligase, at 2,382,615 to 2,384,240
_RS11155
RR42_RS11160: RR42_RS11160 - hypothetical protein, at 2,384,662 to 2,386,197
_RS11160
RR42_RS11165: RR42_RS11165 - methionine sulfoxide reductase B, at 2,386,335 to 2,386,781
_RS11165
RR42_RS11170: RR42_RS11170 - septation protein A, at 2,386,852 to 2,387,391
_RS11170
RR42_RS11175: RR42_RS11175 - BolA family transcriptional regulator, at 2,387,476 to 2,387,790
_RS11175
Group
Condition
RR42
_RS11155
RR42
_RS11160
RR42
_RS11165
RR42
_RS11170
RR42
_RS11175
carbon source
Pimelic (C)
-1.8
+0.3
-0.5
N.D.
-0.5
stress
R2A with Chlorite 4 mM
+0.0
-0.3
-1.4
N.D.
-0.6
stress
R2A with Chlorite 4 mM
-0.0
+0.3
-2.4
N.D.
+0.1
carbon source
Valeric (C)
+0.0
-0.2
-0.5
N.D.
-1.0
stress
R2A with Lomefloxacin 0.001 mM
+0.3
+0.0
-1.2
N.D.
-0.6
carbon source
Pimelic (C)
-1.6
+0.2
+0.1
N.D.
-0.1
carbon source
Octanoic (C)
-0.2
-0.0
-0.3
N.D.
-0.7
stress
R2A with Bacitracin 0.5 mg/ml
-0.1
-0.0
-0.9
N.D.
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-0.1
-0.7
N.D.
-0.4
carbon source
Hexanoic (C)
+0.1
+0.0
-0.7
N.D.
-0.4
nitrogen source
L-Lysine (N)
-0.0
+0.0
-0.4
N.D.
-0.6
lb
LB
-0.2
+0.0
-0.3
N.D.
-0.6
carbon source
succinate (C)
-0.1
-0.1
-0.1
N.D.
-0.7
carbon source
adipate (C)
-1.4
+0.6
+0.0
N.D.
-0.2
carbon source
Valeric (C)
-0.0
-0.2
-0.4
N.D.
-0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.3
-0.1
-0.4
N.D.
-0.0
nitrogen source
Glycine (N)
-0.1
+0.0
-0.6
N.D.
-0.2
nitrogen source
L-Phenylalanine (N)
-0.1
+0.1
-0.5
N.D.
-0.3
carbon source
adipate (C)
-1.3
+0.1
+0.2
N.D.
+0.4
stress
R2A with Cobalt chloride 0.5 mM
+0.0
+0.1
-0.9
N.D.
+0.2
carbon source
Suberic (C)
-0.2
-0.1
+0.4
N.D.
-0.6
carbon source
Carbon source D,L-Lactate 10 mM
-0.3
+0.1
+0.3
N.D.
-0.6
carbon source
Carbon source Phenylacetic 2.5 mM
+0.6
-0.0
-0.2
N.D.
-0.7
carbon source
butyrate (C)
-0.1
+0.1
-0.6
N.D.
+0.2
carbon source
Protocatechuic Acid (C)
-0.0
+0.2
+0.1
N.D.
-0.7
stress
R2A with Cobalt chloride 0.3 mM
+0.1
+0.2
-0.0
N.D.
-0.6
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.3
-0.2
+0.2
N.D.
+0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.0
-0.3
-0.2
N.D.
+0.9
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.1
-0.3
+1.3
N.D.
-0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
+0.1
+0.1
N.D.
+0.7
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