Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS11115 and RR42_RS11120 overlap by 11 nucleotidesRR42_RS11120 and RR42_RS11125 are separated by 230 nucleotidesRR42_RS11125 and RR42_RS11130 are separated by 74 nucleotidesRR42_RS11130 and RR42_RS11135 overlap by 1 nucleotides RR42_RS11115: RR42_RS11115 - ornithine cyclodeaminase, at 2,374,012 to 2,374,983 _RS11115 RR42_RS11120: RR42_RS11120 - DNA-binding protein, at 2,374,973 to 2,375,614 _RS11120 RR42_RS11125: RR42_RS11125 - glycerophosphodiester phosphodiesterase, at 2,375,845 to 2,377,218 _RS11125 RR42_RS11130: RR42_RS11130 - mannosyltransferase, at 2,377,293 to 2,378,006 _RS11130 RR42_RS11135: RR42_RS11135 - branched-chain amino acid ABC transporter substrate-binding protein, at 2,378,006 to 2,378,779 _RS11135
Group Condition RR42_RS11115 RR42_RS11120 RR42_RS11125 RR42_RS11130 RR42_RS11135
carbon source adipate (C) -0.2 -1.4 +0.1 -2.0 -2.0
carbon source Pimelic (C) -0.2 -0.6 -0.1 -1.8 -1.8
carbon source adipate (C) +0.3 -1.1 +0.2 -2.2 -1.8
carbon source Pimelic (C) -0.1 -0.7 +0.2 -1.6 -1.6
lb LB -0.9 -1.9 -0.1 +0.3 -0.0
stress R2A with Cobalt chloride 0.5 mM -0.4 -2.6 +0.0 -0.1 +0.5
stress R2A with Nickel (II) chloride 0.5 mM -0.1 -1.9 -0.2 -0.1 -0.0
stress R2A with Vancomycin 0.5 mg/ml -0.5 -1.0 -0.1 -0.3 -0.1
carbon source D-Lactate (C) -0.4 -0.8 -0.3 -0.1 -0.0
stress R2A with Nickel (II) chloride 0.35 mM +0.2 -1.7 -0.2 -0.3 +0.4
stress R2A with nitrate 150 mM -0.7 -1.0 -0.0 +0.1 +0.2
stress R2A with Nickel (II) chloride 0.25 mM -0.2 -1.5 +0.0 +0.0 +0.1
stress R2A with Paraquat dichloride 0.064 mg/ml -0.1 -1.0 +0.2 -0.2 -0.3
stress R2A with Nickel (II) chloride 0.35 mM -0.4 -1.2 +0.1 +0.1 +0.2
stress R2A with Cobalt chloride 0.3 mM -0.4 -1.6 -0.0 +0.3 +0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -1.1 +0.1 +0.0 +0.2
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.0 -1.0 +0.0 +0.2 -0.4
carbon source Octanoic (C) -0.7 -0.6 +0.1 +0.2 -0.1
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +0.3 -1.0 +0.2 +0.0 -0.4
stress R2A with Thallium(I) acetate 0.001 mg/ml +0.1 -0.9 +0.3 -0.1 -0.3
nitrogen source D-Alanine (N) +0.2 -0.7 -0.2 +0.1 -0.3
carbon source Octanoic (C) -0.4 -0.7 -0.0 +0.1 +0.2
nitrogen source L-Leucine (N) -0.6 -0.5 +0.3 -0.1 +0.2
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.4 -0.8 -0.2 +0.2 -0.3
nitrogen source L-Glutamine (N) -0.9 +0.0 -0.1 +0.2 +0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.3 +0.7 -0.1 -0.1 -0.2
carbon source D,L-Lactate (C) +0.2 -0.7 +0.1 +0.1 +0.4
stress R2A with nitrate 200 mM +0.2 -0.6 +0.2 +0.6 +0.0
stress R2A with Zinc 0.1 mM +0.2 -0.6 +0.1 +0.4 +0.2
nitrogen source L-Leucine (N) +0.4 -0.5 +0.2 +0.4 +0.2
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