Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS09305 and RR42_RS09310 are separated by 18 nucleotidesRR42_RS09310 and RR42_RS09315 are separated by 102 nucleotidesRR42_RS09315 and RR42_RS09320 are separated by 22 nucleotidesRR42_RS09320 and RR42_RS09325 overlap by 4 nucleotides RR42_RS09305: RR42_RS09305 - LysR family transcriptional regulator, at 1,967,587 to 1,968,483 _RS09305 RR42_RS09310: RR42_RS09310 - IclR family transcriptional regulator, at 1,968,502 to 1,969,440 _RS09310 RR42_RS09315: RR42_RS09315 - MFS transporter, at 1,969,543 to 1,970,538 _RS09315 RR42_RS09320: RR42_RS09320 - long-chain fatty acid--CoA ligase, at 1,970,561 to 1,972,123 _RS09320 RR42_RS09325: RR42_RS09325 - citrate synthase, at 1,972,120 to 1,972,917 _RS09325
Group Condition RR42_RS09305 RR42_RS09310 RR42_RS09315 RR42_RS09320 RR42_RS09325
carbon source Protocatechuic Acid (C) -0.5 -2.2 +0.4 -0.3 +0.1
carbon source Protocatechuic Acid (C) -0.6 -1.3 -0.1 -0.3 -0.0
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.0 -1.8 +0.1 +0.1 -0.2
carbon source Heptanoic (C) -0.2 -1.6 +0.1 -0.0 -0.0
carbon source Valeric (C) -0.0 -1.7 -0.3 +0.2 +0.1
nitrogen source L-Glutamine (N) -0.4 -1.1 +0.5 +0.2 -0.9
carbon source succinate (C) -0.5 -0.7 -0.2 +0.1 -0.1
carbon source adipate (C) +0.2 -0.9 +0.0 -0.1 -0.5
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate -0.3 +0.1 -0.2 -0.3 -0.6
stress R2A with Polymyxin B sulfate 0.005 mg/ml -0.2 +0.4 -0.3 -0.4 -0.1
temperature R2A 37C +0.1 +0.4 -0.4 -0.1 -0.7
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.4 +0.4 -0.2 +0.3 -0.4
carbon source Carbon source D,L-Lactate 10 mM +0.6 -0.6 -0.0 -0.2 -0.1
nitrogen source L-Threonine (N) +0.3 +0.1 +0.3 -0.3 -0.6
carbon source Carbon source Phenylacetic 2.5 mM +0.5 -0.9 +0.2 +0.0 -0.1
carbon source propionate (C) +0.3 +0.3 -0.1 +0.1 -0.6
nitrogen source L-Valine (N) +0.2 +0.4 -0.1 -0.1 -0.5
carbon source L-Leucine (C) +0.4 +0.4 +0.1 -0.2 -0.6
nitrogen source L-Lysine (N) +0.4 +0.5 -0.1 -0.1 -0.4
stress R2A with Sisomicin 0.035 mg/ml -0.5 +0.2 +0.1 -0.1 +0.6
carbon source D,L-Lactate (C) +0.4 +0.6 -0.2 -0.1 -0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.5 +0.9 +0.2 -0.4 +0.3
stress R2A with Nickel (II) chloride 0.35 mM -0.5 +0.6 +0.1 +0.5 -0.2
carbon source D-Gluconic Acid (C) +0.1 +0.6 -0.2 +0.3 -0.2
stress R2A with nitrate 150 mM -0.1 +0.5 -0.2 +0.3 +0.4
carbon source L-Lactate (C) +0.5 +0.7 -0.1 -0.2 -0.1
carbon source pyruvate (C) +0.7 +0.5 +0.1 +0.1 -0.6
nitrogen source L-Phenylalanine (N) +0.2 +0.4 -0.3 +0.1 +0.5
lb LB -0.4 +1.0 +0.3 -0.2 +0.2
stress R2A with Vancomycin 0.5 mg/ml -0.0 +0.7 +0.5 +0.1 +0.5
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RR42_RS09305
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RR42_RS09325
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