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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS09250 and RR42_RS09255 are separated by 673 nucleotides
RR42_RS09255 and RR42_RS09260 are separated by 311 nucleotides
RR42_RS09260 and RR42_RS09265 are separated by 186 nucleotides
RR42_RS09265 and RR42_RS09270 are separated by 143 nucleotides
RR42_RS09250: RR42_RS09250 - hypothetical protein, at 1,955,077 to 1,955,400
_RS09250
RR42_RS09255: RR42_RS09255 - copper resistance protein CopQ, at 1,956,074 to 1,956,586
_RS09255
RR42_RS09260: RR42_RS09260 - TetR family transcriptional regulator, at 1,956,898 to 1,957,464
_RS09260
RR42_RS09265: RR42_RS09265 - NUDIX hydrolase, at 1,957,651 to 1,959,357
_RS09265
RR42_RS09270: RR42_RS09270 - flagellar hook protein, at 1,959,501 to 1,960,931
_RS09270
Group
Condition
RR42
_RS09250
RR42
_RS09255
RR42
_RS09260
RR42
_RS09265
RR42
_RS09270
carbon source
Dodecandioic (C)
-0.6
+0.0
-0.0
-0.2
-0.9
carbon source
Azelaic (C)
-0.8
-0.3
-0.3
-0.1
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.1
-1.2
+0.3
+0.0
-0.5
carbon source
Suberic (C)
-0.3
-0.1
-0.4
-0.1
-0.5
carbon source
D,L-Lactate (C)
-0.1
-0.4
-0.7
+0.1
-0.3
carbon source
Valeric (C)
-0.4
-0.6
-0.3
-0.1
+0.0
stress
R2A with Chlorite 4 mM
+0.0
-0.6
-0.5
-0.2
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
-1.0
+0.2
+0.4
-0.4
carbon source
Disodium Glutarate (C)
-0.2
+0.2
-0.7
+0.1
-0.2
r2a
R2A
-0.1
-0.3
-0.9
+0.0
+0.4
carbon source
L-Glutamine (C)
+0.0
-1.0
+0.2
+0.1
-0.2
carbon source
Carbon source D,L-Lactate 10 mM
-0.1
+0.5
-0.7
-0.2
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.0
-0.0
-1.1
+0.2
+0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.2
-0.7
-0.3
-0.1
+0.6
stress
R2A with Lomefloxacin 0.001 mM
-0.3
-0.8
+0.6
-0.1
+0.0
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.2
+0.3
-0.6
-0.6
+0.5
nitrogen source
Glucuronamide (N)
-0.1
+0.6
-0.4
-0.3
+0.1
stress
R2A with nitrate 200 mM
+0.0
-0.7
+0.4
+0.1
+0.1
carbon source
adipate (C)
+0.1
-0.3
+0.6
-0.1
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.1
-0.6
+0.7
+0.1
+0.0
stress
R2A with Cobalt chloride 0.5 mM
+0.0
-1.3
+0.9
+0.2
+0.5
lb
LB
+0.1
-0.0
+0.7
-0.6
+0.1
carbon source
Octanoic (C)
-0.1
+0.2
+0.8
+0.1
-0.3
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.2
+0.4
+1.0
-0.2
-0.5
stress
R2A with Nickel (II) chloride 0.35 mM
+0.1
-0.0
+1.4
+0.0
+0.0
stress
R2A with Cobalt chloride 0.3 mM
-0.1
-1.2
+2.5
+0.4
-0.0
stress
R2A with Nickel (II) chloride 0.5 mM
+0.3
+0.1
+1.7
+0.1
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
-0.2
+0.4
+1.9
+0.1
+0.2
stress
R2A with Zinc 0.1 mM
+0.1
-0.5
+2.5
-0.0
+0.4
stress
R2A with copper (II) chloride 0.25 mM
+0.1
+0.1
+2.5
-0.0
+0.1
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RR42_RS09260
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