Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS09070 and RR42_RS09075 are separated by 2 nucleotidesRR42_RS09075 and RR42_RS09080 are separated by 49 nucleotidesRR42_RS09080 and RR42_RS09085 overlap by 1 nucleotidesRR42_RS09085 and RR42_RS09090 are separated by 223 nucleotides RR42_RS09070: RR42_RS09070 - carbohydrate kinase, at 1,907,447 to 1,909,072 _RS09070 RR42_RS09075: RR42_RS09075 - amino acid dehydrogenase, at 1,909,075 to 1,910,373 _RS09075 RR42_RS09080: RR42_RS09080 - C4-dicarboxylate ABC transporter permease, at 1,910,423 to 1,911,733 _RS09080 RR42_RS09085: RR42_RS09085 - C4-dicarboxylate ABC transporter permease, at 1,911,733 to 1,912,284 _RS09085 RR42_RS09090: RR42_RS09090 - C4-dicarboxylate ABC transporter substrate-binding protein, at 1,912,508 to 1,913,467 _RS09090
Group Condition RR42_RS09070 RR42_RS09075 RR42_RS09080 RR42_RS09085 RR42_RS09090
nitrogen source casaminos (N) -0.3 -0.6 -0.4 -1.7 -0.8
temperature R2A 23C -0.8 -0.8 -0.2 -1.6 -0.3
stress R2A with Dimethyl Sulfoxide 5 vol% -0.4 -0.4 -0.5 -1.1 -0.2
nitrogen source L-Serine (N) -0.5 -0.3 -0.5 -0.8 -0.5
nitrogen source L-Glutamine (N) -0.8 -0.8 -0.4 -0.1 -0.2
nitrogen source Glucuronamide (N) -0.6 -0.7 -0.5 -0.2 -0.3
nitrogen source L-Leucine (N) -0.4 -0.1 +0.1 -1.8 -0.1
temperature R2A 23C -0.5 -0.6 -0.0 -0.9 -0.1
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.1 -0.1 +0.1 -1.8 -0.3
stress R2A with Polymyxin B sulfate 0.005 mg/ml -0.0 +0.1 -0.1 -2.2 +0.1
carbon source Octanoic (C) -0.5 -0.0 +0.1 -1.8 +0.2
stress R2A with Paraquat dichloride 0.064 mg/ml -0.0 -0.2 -0.4 -1.2 -0.2
stress R2A with D-Cycloserine 0.5 mg/ml -0.1 +0.2 +0.1 -2.2 +0.2
stress R2A with Nickel (II) chloride 0.35 mM -0.8 -0.3 -0.3 -0.6 +0.1
nitrogen source D-Alanine (N) -0.4 +0.0 +0.1 -1.1 -0.4
carbon source Pimelic (C) -0.1 -0.1 -0.2 -1.5 +0.2
carbon source Disodium Glutarate (C) +0.1 -0.1 -0.1 -1.7 +0.2
r2a R2A -0.6 -0.5 -0.3 +0.3 -0.4
carbon source L-Asparagine (C) -0.1 +0.2 -0.0 -1.5 +0.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.2 -0.2 -0.4 +1.1 -0.3
carbon source Octanoic (C) +0.1 +0.5 -0.0 -1.1 -0.1
stress R2A with sodium fluoride 100 mM -0.1 +0.5 +0.1 -0.8 +0.3
lb LB +0.3 -0.0 +0.5 -0.7 +0.2
stress R2A with Nickel (II) chloride 0.35 mM +0.3 +0.5 +0.3 -0.7 +0.2
stress R2A with Nickel (II) chloride 0.25 mM +0.5 +0.3 +0.2 -0.6 +0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.4 +0.5 +0.1 +0.6 -0.2
carbon source D-Gluconic Acid (C) +0.4 +0.5 +0.0 +0.9 -0.1
stress R2A with Nickel (II) chloride 0.5 mM +0.5 +0.5 +0.1 +0.8 +0.3
nitrogen source L-Asparagine (N) +0.1 +0.4 +0.2 +1.4 +0.4
nitrogen source L-Isoleucine (N) +0.2 +0.1 +0.2 +1.8 +0.4
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