Private Fitness
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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS08465 and RR42_RS08470 are separated by 212 nucleotides
RR42_RS08470 and RR42_RS08475 are separated by 20 nucleotides
RR42_RS08475 and RR42_RS08480 overlap by 8 nucleotides
RR42_RS08480 and RR42_RS08485 are separated by 405 nucleotides
RR42_RS08465: RR42_RS08465 - hypothetical protein, at 1,784,058 to 1,784,357
_RS08465
RR42_RS08470: RR42_RS08470 - hypothetical protein, at 1,784,570 to 1,784,776
_RS08470
RR42_RS08475: RR42_RS08475 - hypothetical protein, at 1,784,797 to 1,785,000
_RS08475
RR42_RS08480: RR42_RS08480 - hypothetical protein, at 1,784,993 to 1,785,235
_RS08480
RR42_RS08485: RR42_RS08485 - toprim domain protein, at 1,785,641 to 1,788,346
_RS08485
Group
Condition
RR42
_RS08465
RR42
_RS08470
RR42
_RS08475
RR42
_RS08480
RR42
_RS08485
stress
R2A with Nickel (II) chloride 0.35 mM
-0.9
-2.4
N.D.
+0.4
-0.2
carbon source
Dodecandioic (C)
-0.7
-1.7
N.D.
-0.6
-0.0
stress
R2A with copper (II) chloride 0.25 mM
-1.2
-1.2
N.D.
-0.0
-0.3
stress
R2A with Zinc 0.1 mM
-1.1
+0.2
N.D.
-1.6
+0.2
stress
R2A with Cisplatin 0.001 mg/ml
-1.4
-0.6
N.D.
-0.4
+0.2
carbon source
Carbon source D,L-Lactate 10 mM
-0.7
+0.1
N.D.
-1.4
-0.1
carbon source
Dodecandioic (C)
-1.2
-0.7
N.D.
-0.2
+0.0
carbon source
succinate (C)
-0.7
-0.4
N.D.
-0.7
+0.0
carbon source
Octanoic (C)
-0.6
-0.7
N.D.
-0.1
-0.5
carbon source
Heptanoic (C)
-0.6
-0.7
N.D.
-0.5
+0.0
carbon source
Azelaic (C)
-0.2
-1.7
N.D.
+0.0
+0.2
carbon source
Valeric (C)
-0.8
-1.2
N.D.
+0.4
+0.0
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-1.2
+0.2
N.D.
-0.5
+0.0
carbon source
Octanoic (C)
-0.4
-1.0
N.D.
+0.4
-0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.5
-1.3
N.D.
-0.4
-0.1
temperature
R2A 37C
+0.1
-1.5
N.D.
+0.3
-0.0
stress
R2A with Vancomycin 0.5 mg/ml
-1.3
-0.2
N.D.
+0.3
+0.1
stress
R2A with Cobalt chloride 0.3 mM
+0.3
-0.7
N.D.
-0.7
+0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.3
N.D.
-1.0
+0.4
nitrogen source
L-Leucine (N)
+0.3
-0.9
N.D.
+0.3
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
+0.1
-1.0
N.D.
+0.6
-0.1
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.5
-0.5
N.D.
+0.4
+0.4
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.4
-1.0
N.D.
+0.3
+0.0
nitrogen source
casaminos (N)
+0.7
-0.8
N.D.
+0.1
-0.1
nitrogen source
L-Leucine (N)
+1.0
+0.3
N.D.
-0.6
-0.0
nitrogen source
Glycine (N)
+0.5
+0.7
N.D.
+0.4
-0.1
carbon source
succinate (C)
+0.5
+0.8
N.D.
+0.4
-0.2
nitrogen source
L-Glutamine (N)
+0.1
+1.4
N.D.
+0.3
-0.2
nitrogen source
L-Isoleucine (N)
+1.1
+0.6
N.D.
-0.2
+0.1
stress
R2A with Lomefloxacin 0.001 mM
+0.8
+0.6
N.D.
+1.3
+0.4
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