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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS07820 and RR42_RS07825 are separated by 155 nucleotides
RR42_RS07825 and RR42_RS07830 are separated by 237 nucleotides
RR42_RS07830 and RR42_RS07835 are separated by 74 nucleotides
RR42_RS07835 and RR42_RS07840 are separated by 105 nucleotides
RR42_RS07820: RR42_RS07820 - hypothetical protein, at 1,674,130 to 1,675,425
_RS07820
RR42_RS07825: RR42_RS07825 - D-amino acid oxidase, at 1,675,581 to 1,676,849
_RS07825
RR42_RS07830: RR42_RS07830 - N-acyl-L-amino acid amidohydrolase, at 1,677,087 to 1,678,493
_RS07830
RR42_RS07835: RR42_RS07835 - membrane protein, at 1,678,568 to 1,679,872
_RS07835
RR42_RS07840: RR42_RS07840 - acetylornithine deacetylase, at 1,679,978 to 1,681,183
_RS07840
Group
Condition
RR42
_RS07820
RR42
_RS07825
RR42
_RS07830
RR42
_RS07835
RR42
_RS07840
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-1.0
-0.4
-0.4
-0.2
-0.1
carbon source
Protocatechuic Acid (C)
-0.4
-1.1
+0.2
-0.0
-0.2
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
-0.9
+0.2
+0.0
-0.0
stress
R2A with Cobalt chloride 0.3 mM
-0.2
-0.7
-0.3
+0.2
+0.2
nitrogen source
L-Valine (N)
-0.2
-0.7
-0.0
+0.2
+0.0
stress
R2A with Cephalothin 0.25 mg/ml
+0.1
-0.8
+0.0
+0.1
+0.1
carbon source
propionate (C)
-0.4
-0.5
+0.1
+0.1
+0.2
stress
R2A with Nickel (II) chloride 0.5 mM
-0.1
-0.7
+0.1
+0.3
-0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.3
-0.8
+0.0
-0.2
+0.2
nitrogen source
nitrite (N)
-0.3
+0.4
-0.0
-0.2
-0.3
lb
LB
+0.2
+0.3
-0.5
-0.4
+0.4
carbon source
Carbon source Phenylacetic 2.5 mM
-0.4
+0.5
+0.1
+0.2
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.0
+0.5
-0.4
-0.2
+0.1
nitrogen source
L-Leucine (N)
-0.4
+0.8
-0.0
-0.3
+0.0
nitrogen source
nitrate (N)
-0.2
+0.8
-0.0
-0.1
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.4
+0.6
+0.3
-0.3
-0.1
stress
R2A with sodium fluoride 100 mM
+0.2
+0.6
-0.2
-0.2
-0.0
carbon source
pyruvate (C)
-0.2
+0.3
+0.1
-0.2
+0.3
carbon source
Ethanol (C)
+0.1
-0.4
+0.1
+0.2
+0.3
carbon source
L-Lactate (C)
-0.4
+0.5
+0.1
+0.0
+0.3
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.3
+0.7
-0.0
+0.0
-0.3
stress
R2A with Cobalt chloride 0.5 mM
-0.1
+0.3
-0.1
+0.1
+0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.0
+0.8
+0.2
-0.3
+0.1
carbon source
L-Malic (C)
+0.2
+0.8
-0.1
-0.0
+0.0
stress
R2A with Thallium(I) acetate 0.001 mg/ml
+0.0
+0.3
-0.1
+0.4
+0.4
stress
R2A with nitrate 200 mM
+0.2
+0.6
-0.2
+0.1
+0.3
carbon source
L-Histidine (C)
+0.0
+0.8
-0.1
+0.2
+0.1
carbon source
L-Lactate (C)
+0.1
+0.6
+0.1
+0.1
+0.2
stress
R2A with Sisomicin 0.035 mg/ml
+0.3
+1.1
-0.1
+0.1
+0.0
stress
R2A with Chloride 300 mM
+0.1
+0.8
+0.1
+0.2
+0.3
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RR42_RS07830
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