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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS07770 and RR42_RS07775 are separated by 59 nucleotides
RR42_RS07775 and RR42_RS07780 are separated by 363 nucleotides
RR42_RS07780 and RR42_RS07785 are separated by 195 nucleotides
RR42_RS07785 and RR42_RS07795 are separated by 1218 nucleotides
RR42_RS07770: RR42_RS07770 - hypothetical protein, at 1,663,956 to 1,664,780
_RS07770
RR42_RS07775: RR42_RS07775 - ABC transporter substrate-binding protein, at 1,664,840 to 1,665,733
_RS07775
RR42_RS07780: RR42_RS07780 - hypothetical protein, at 1,666,097 to 1,666,279
_RS07780
RR42_RS07785: RR42_RS07785 - hypothetical protein, at 1,666,475 to 1,666,762
_RS07785
RR42_RS07795: RR42_RS07795 - chemotaxis protein, at 1,667,981 to 1,669,690
_RS07795
Group
Condition
RR42
_RS07770
RR42
_RS07775
RR42
_RS07780
RR42
_RS07785
RR42
_RS07795
carbon source
L-Proline (C)
-0.7
+0.0
-0.5
-0.3
-0.1
carbon source
Suberic (C)
-0.0
-0.1
-0.4
-0.5
-0.3
carbon source
Heptanoic (C)
-0.2
+0.1
-0.6
-0.5
-0.2
nitrogen source
L-Leucine (N)
-0.6
+0.1
-0.5
-0.2
-0.0
stress
R2A with nitrate 150 mM
-0.6
-0.3
+0.0
+0.4
-0.4
stress
R2A with Cobalt chloride 0.5 mM
-0.8
+0.3
+0.2
-0.5
+0.1
carbon source
Protocatechuic Acid (C)
+0.2
+0.0
-1.2
+0.2
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
-0.8
+0.0
+0.4
-0.4
-0.0
carbon source
Trisodium citrate (C)
-0.5
+0.2
+0.1
-0.1
-0.4
nitrogen source
L-Glutamine (N)
+0.3
-0.2
-0.8
+0.5
-0.3
carbon source
a-Ketoglutaric (C)
-0.3
+0.4
-0.3
-0.3
-0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.4
+0.1
+0.6
-0.1
-0.4
stress
R2A with A22 0.01 mg/ml
+0.1
+0.1
+0.5
-0.8
-0.1
carbon source
L-Lactate (C)
-0.3
+0.2
+0.4
-0.3
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.0
-0.4
-0.1
+0.8
-0.5
stress
R2A with Cobalt chloride 0.3 mM
+0.6
-0.0
+0.5
-0.5
-0.6
carbon source
D-Lactate (C)
-0.1
+0.3
+0.4
-0.4
-0.1
stress
R2A with Zinc 0.1 mM
+0.2
+0.3
+0.5
-0.4
+0.0
stress
R2A with Vancomycin 0.5 mg/ml
-0.2
+0.5
+0.5
-0.2
-0.1
stress
R2A with Chloride 300 mM
-0.2
+0.2
+0.9
+0.1
-0.1
carbon source
L-Histidine (C)
-0.2
+0.3
+0.7
-0.1
+0.1
carbon source
D,L-Lactate (C)
-0.4
+0.3
+0.7
+0.2
-0.1
stress
R2A with copper (II) chloride 0.25 mM
-0.1
+0.3
+0.3
+0.5
-0.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.0
+0.5
+0.9
-0.1
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.0
-0.2
+0.5
+1.0
-0.0
carbon source
propionate (C)
-0.1
+0.1
+1.0
+0.2
+0.0
stress
R2A with Nickel (II) chloride 0.5 mM
+0.4
+0.1
+0.4
+0.4
+0.0
stress
R2A with nitrate 200 mM
+0.1
+0.5
+0.7
-0.0
+0.1
stress
R2A with Lomefloxacin 0.001 mM
+0.6
+0.1
+0.3
+0.4
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.2
-0.0
+0.7
+0.7
+0.1
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RR42_RS07780
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