Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS07540 and RR42_RS07545 overlap by 4 nucleotidesRR42_RS07545 and RR42_RS07550 overlap by 4 nucleotidesRR42_RS07550 and RR42_RS07555 are separated by 330 nucleotidesRR42_RS07555 and RR42_RS07560 are separated by 446 nucleotides RR42_RS07540: RR42_RS07540 - ABC transporter permease, at 1,611,692 to 1,612,717 _RS07540 RR42_RS07545: RR42_RS07545 - branched-chain amino acid ABC transporter substrate-binding protein, at 1,612,714 to 1,613,562 _RS07545 RR42_RS07550: RR42_RS07550 - ABC transporter, at 1,613,559 to 1,614,278 _RS07550 RR42_RS07555: RR42_RS07555 - potassium transporter Kup, at 1,614,609 to 1,616,507 _RS07555 RR42_RS07560: RR42_RS07560 - hypothetical protein, at 1,616,954 to 1,618,537 _RS07560
Group Condition RR42_RS07540 RR42_RS07545 RR42_RS07550 RR42_RS07555 RR42_RS07560
carbon source adipate (C) -1.5 -1.7 -1.0 -3.1 -0.3
carbon source adipate (C) -1.5 -1.6 -1.2 -2.9 -0.1
carbon source Pimelic (C) -0.7 -1.0 -0.7 -3.6 -0.1
carbon source a-Ketoglutaric (C) -0.2 -0.3 -0.4 -4.9 +0.1
carbon source Pimelic (C) -1.1 -1.0 -0.5 -2.7 -0.1
carbon source D-Fructose (C) -0.0 -0.2 -0.0 -5.0 +0.0
carbon source L-Asparagine (C) -0.1 -0.3 -0.1 -4.6 +0.0
carbon source Disodium Glutarate (C) -0.5 -0.5 -0.5 -3.4 -0.1
stress R2A with Nickel (II) chloride 0.25 mM +0.2 +0.0 -0.1 -5.1 +0.0
carbon source L-Phenylalanine (C) +0.0 +0.1 -0.1 -4.9 -0.1
carbon source L-Leucine (C) +0.1 -0.1 +0.1 -4.9 +0.0
nitrogen source Glycine (N) -0.0 -0.2 +0.2 -4.7 -0.1
carbon source L-Leucine (C) +0.0 -0.0 +0.1 -4.9 +0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.2 -0.0 -4.9 +0.0
carbon source Ethanol (C) +0.1 +0.1 +0.1 -4.9 -0.0
carbon source L-Glutamine (C) -0.1 +0.2 +0.1 -4.8 -0.1
carbon source D,L-Lactate (C) +0.1 +0.0 +0.1 -4.8 -0.0
stress R2A with D-Cycloserine 0.5 mg/ml +0.2 -0.3 +0.2 -4.4 -0.2
stress R2A with nitrate 200 mM +0.1 -0.1 +0.0 -4.6 +0.0
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.0 +0.0 -0.2 -4.4 +0.1
carbon source L-Tryptophan (C) +0.0 +0.1 +0.3 -4.8 -0.1
carbon source Ethanol (C) +0.0 -0.2 +0.0 -4.4 +0.1
nitrogen source L-Phenylalanine (N) +0.1 +0.1 +0.1 -4.5 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.0 +0.1 -4.5 +0.1
stress R2A with A22 0.01 mg/ml -0.0 +0.1 +0.2 -4.4 +0.1
carbon source pyruvate (C) +0.2 +0.2 +0.3 -4.6 -0.0
stress R2A with Cisplatin 0.001 mg/ml -0.0 +0.2 +0.0 -4.4 +0.1
carbon source L-Threonine (C) +0.1 +0.2 +0.2 -4.5 +0.1
nitrogen source L-Glutamine (N) -0.1 +0.2 +0.4 -3.8 -0.2
stress R2A with Lomefloxacin 0.001 mM +0.0 +0.1 -0.1 +4.8 -0.1
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