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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS07450 and RR42_RS07455 are separated by 152 nucleotides
RR42_RS07455 and RR42_RS07460 are separated by 323 nucleotides
RR42_RS07460 and RR42_RS07465 are separated by 57 nucleotides
RR42_RS07465 and RR42_RS07470 are separated by 101 nucleotides
RR42_RS07450: RR42_RS07450 - ABC transporter permease, at 1,592,478 to 1,593,374
_RS07450
RR42_RS07455: RR42_RS07455 - ABC transporter substrate-binding protein, at 1,593,527 to 1,594,498
_RS07455
RR42_RS07460: RR42_RS07460 - aldo/keto reductase, at 1,594,822 to 1,595,880
_RS07460
RR42_RS07465: RR42_RS07465 - dihydroorotate dehydrogenase, at 1,595,938 to 1,596,972
_RS07465
RR42_RS07470: RR42_RS07470 - arginyl-tRNA-protein transferase, at 1,597,074 to 1,597,922
_RS07470
Group
Condition
RR42
_RS07450
RR42
_RS07455
RR42
_RS07460
RR42
_RS07465
RR42
_RS07470
stress
R2A with Chlorite 4 mM
-1.5
-2.5
+0.1
N.D.
-0.1
stress
R2A with Cobalt chloride 0.5 mM
-1.7
-1.5
+0.3
N.D.
+0.0
stress
R2A with Cobalt chloride 0.3 mM
-1.1
-1.9
+0.1
N.D.
+0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-1.0
-0.5
-0.4
N.D.
-0.2
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.8
-1.2
-0.0
N.D.
-0.0
stress
R2A with Chlorite 4 mM
-0.9
-1.2
+0.1
N.D.
+0.2
stress
R2A with Lomefloxacin 0.00075 mM
-0.4
-0.7
-0.2
N.D.
+0.1
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.4
-0.7
+0.3
N.D.
-0.3
stress
R2A with Nickel (II) chloride 0.5 mM
-0.4
-0.6
+0.1
N.D.
+0.4
stress
R2A with Nickel (II) chloride 0.25 mM
-0.1
-0.5
+0.4
N.D.
+0.1
stress
R2A with Chloride 300 mM
+0.4
-0.4
+0.2
N.D.
-0.1
carbon source
Disodium Glutarate (C)
+0.1
+0.2
+0.4
N.D.
-0.5
nitrogen source
L-Threonine (N)
+0.4
+0.1
+0.2
N.D.
-0.4
carbon source
adipate (C)
+0.1
-0.3
+0.2
N.D.
+0.5
carbon source
4-Hydroxybenzoic Acid (C)
+0.6
+0.2
+0.3
N.D.
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.5
+0.4
-0.1
N.D.
+0.1
nitrogen source
L-Tryptophan (N)
+0.6
+0.4
+0.1
N.D.
-0.1
nitrogen source
L-Tryptophan (N)
+0.2
+0.5
+0.4
N.D.
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.9
+0.5
+0.2
N.D.
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.8
+0.7
-0.0
N.D.
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.2
+0.7
+0.4
N.D.
+0.1
nitrogen source
L-Valine (N)
+0.7
+0.8
+0.2
N.D.
-0.0
nitrogen source
L-Valine (N)
+0.8
+0.7
+0.2
N.D.
+0.1
carbon source
L-Tryptophan (C)
+1.3
+1.1
-0.1
N.D.
-0.0
carbon source
L-Histidine (C)
+1.2
+1.2
+0.1
N.D.
-0.1
nitrogen source
nitrite (N)
+0.4
+1.0
+0.2
N.D.
+0.9
carbon source
L-Tryptophan (C)
+1.3
+1.2
+0.3
N.D.
-0.1
carbon source
L-Histidine (C)
+1.4
+1.6
+0.3
N.D.
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
+1.8
+1.8
+0.1
N.D.
-0.0
lb
LB
+1.8
+1.9
+0.4
N.D.
+0.2
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