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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS07265 and RR42_RS07270 are separated by 164 nucleotides
RR42_RS07270 and RR42_RS07275 are separated by 347 nucleotides
RR42_RS07275 and RR42_RS07280 are separated by 369 nucleotides
RR42_RS07280 and RR42_RS07285 are separated by 314 nucleotides
RR42_RS07265: RR42_RS07265 - hypothetical protein, at 1,545,785 to 1,546,039
_RS07265
RR42_RS07270: RR42_RS07270 - NAD-glutamate dehydrogenase, at 1,546,204 to 1,551,084
_RS07270
RR42_RS07275: RR42_RS07275 - acetyl-CoA hydrolase, at 1,551,432 to 1,552,946
_RS07275
RR42_RS07280: RR42_RS07280 - hypothetical protein, at 1,553,316 to 1,553,699
_RS07280
RR42_RS07285: RR42_RS07285 - ABC transporter substrate-binding protein, at 1,554,014 to 1,554,988
_RS07285
Group
Condition
RR42
_RS07265
RR42
_RS07270
RR42
_RS07275
RR42
_RS07280
RR42
_RS07285
carbon source
Disodium Glutarate (C)
-0.6
-0.0
+0.2
-0.0
-2.5
carbon source
Disodium Glutarate (C)
-0.7
+0.0
+0.1
+0.2
-1.8
stress
R2A with Lomefloxacin 0.001 mM
-0.7
-0.2
-0.4
-0.2
-0.1
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.6
-0.2
-0.4
-0.1
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-1.0
-0.0
-0.0
-0.4
-0.0
stress
R2A with D-Cycloserine 0.5 mg/ml
-1.1
-0.0
-0.1
+0.2
-0.0
r2a
R2A
-0.8
-0.2
-0.2
+0.2
+0.1
stress
R2A with Zinc 0.1 mM
+0.4
-0.0
-0.1
-0.6
-0.3
carbon source
adipate (C)
-0.4
+0.2
-0.4
+0.2
+0.0
stress
R2A with Lomefloxacin 0.00075 mM
+0.6
-0.2
-0.2
-0.4
-0.2
stress
R2A with Vancomycin 0.5 mg/ml
-0.0
+0.1
+0.1
-0.7
+0.2
carbon source
Dodecandioic (C)
-0.6
-0.0
-0.1
+0.2
+0.3
carbon source
D-Lactate (C)
-0.6
+0.0
+0.0
-0.2
+0.6
carbon source
Octanoic (C)
+0.3
+0.1
-0.1
-0.6
+0.3
nitrogen source
Glucuronamide (N)
+0.3
-0.0
-0.2
-0.5
+0.4
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.6
-0.0
-0.1
+0.1
-0.4
nitrogen source
L-Lysine (N)
+0.4
-0.2
-0.3
-0.1
+0.3
nitrogen source
L-Tryptophan (N)
+0.5
+0.0
-0.1
-0.4
+0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.5
-0.0
+0.1
+0.7
+0.1
lb
LB
+0.8
+0.2
-0.3
+0.1
-0.3
carbon source
a-Ketoglutaric (C)
+0.6
+0.1
-0.0
+0.3
-0.4
nitrogen source
nitrite (N)
+0.5
-0.1
-0.0
-0.2
+0.3
stress
R2A with Nickel (II) chloride 0.5 mM
-0.4
-0.1
+0.2
+0.4
+0.4
carbon source
L-Asparagine (C)
+0.6
-0.2
+0.1
+0.3
+0.2
carbon source
L-Leucine (C)
+0.3
+0.1
-0.1
+0.3
+0.4
stress
R2A with Cisplatin 0.001 mg/ml
+0.6
-0.1
+0.0
+0.2
+0.3
stress
R2A with Nickel (II) chloride 0.25 mM
+0.8
-0.1
-0.1
+0.3
+0.1
nitrogen source
D-Alanine (N)
+1.0
-0.0
-0.1
-0.1
+0.2
nitrogen source
L-Leucine (N)
+0.8
+0.1
+0.2
+0.1
+0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+1.6
+0.1
+0.1
+0.5
-0.6
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RR42_RS07275
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