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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS07235 and RR42_RS07240 are separated by 851 nucleotides
RR42_RS07240 and RR42_RS07245 are separated by 188 nucleotides
RR42_RS07245 and RR42_RS07250 are separated by 20 nucleotides
RR42_RS07250 and RR42_RS07255 are separated by 75 nucleotides
RR42_RS07235: RR42_RS07235 - hypothetical protein, at 1,542,652 to 1,542,936
_RS07235
RR42_RS07240: RR42_RS07240 - hypothetical protein, at 1,543,788 to 1,544,042
_RS07240
RR42_RS07245: RR42_RS07245 - hypothetical protein, at 1,544,231 to 1,544,521
_RS07245
RR42_RS07250: RR42_RS07250 - hypothetical protein, at 1,544,542 to 1,544,784
_RS07250
RR42_RS07255: RR42_RS07255 - hypothetical protein, at 1,544,860 to 1,545,111
_RS07255
Group
Condition
RR42
_RS07235
RR42
_RS07240
RR42
_RS07245
RR42
_RS07250
RR42
_RS07255
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.6
-0.8
-0.7
N.D.
-1.2
stress
R2A with Lomefloxacin 0.001 mM
+0.6
-1.2
-1.3
N.D.
-0.6
temperature
R2A 37C
-1.2
-0.0
-0.6
N.D.
-0.3
temperature
R2A 23C
-0.5
-0.6
-0.7
N.D.
-0.4
carbon source
D-Gluconic Acid (C)
-0.7
+0.1
-1.0
N.D.
-0.5
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.3
+0.2
-0.9
N.D.
-1.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.7
-0.9
-1.5
N.D.
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.4
-0.8
-0.8
N.D.
-0.5
nitrogen source
L-Tryptophan (N)
-0.4
-0.2
+0.5
N.D.
-1.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.4
-0.2
+0.5
N.D.
-1.6
lb
LB
-0.4
-0.5
+0.9
N.D.
-0.6
carbon source
Valeric (C)
-0.3
+0.6
-1.4
N.D.
+0.5
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.9
+0.4
-0.5
N.D.
+0.5
carbon source
propionate (C)
-0.1
+0.5
-1.2
N.D.
+0.4
carbon source
succinate (C)
-0.5
+0.4
-1.0
N.D.
+0.8
carbon source
Octanoic (C)
-0.7
+0.2
-0.8
N.D.
+1.1
carbon source
Valeric (C)
-0.2
+0.5
-0.9
N.D.
+0.8
stress
R2A with Zinc 0.1 mM
-0.2
+1.1
-1.1
N.D.
+0.5
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.6
+0.6
+0.7
N.D.
-0.4
carbon source
Heptanoic (C)
-0.7
+1.2
-0.4
N.D.
+0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.1
-0.8
+1.1
N.D.
+0.2
stress
R2A with Nickel (II) chloride 0.5 mM
-0.6
+0.5
-0.4
N.D.
+0.9
carbon source
succinate (C)
-0.1
+0.8
-0.8
N.D.
+0.5
carbon source
Octanoic (C)
-0.3
+0.6
-0.7
N.D.
+1.0
nitrogen source
L-Glutamine (N)
-0.1
+1.4
+0.1
N.D.
-0.8
stress
R2A with Vancomycin 0.5 mg/ml
-0.7
+1.0
+0.5
N.D.
-0.1
stress
R2A with Chloride 300 mM
-0.6
+0.2
+0.8
N.D.
+0.6
carbon source
Pimelic (C)
+0.1
+0.5
-0.9
N.D.
+1.5
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.6
+0.8
+0.8
N.D.
+0.8
carbon source
L-Lactate (C)
+0.3
+0.7
+0.6
N.D.
+0.7
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