Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntRR42_RS06560 and RR42_RS06565 are separated by 95 nucleotidesRR42_RS06565 and RR42_RS06570 are separated by 14 nucleotidesRR42_RS06570 and RR42_RS06575 are separated by 202 nucleotidesRR42_RS06575 and RR42_RS06580 are separated by 62 nucleotides RR42_RS06560: RR42_RS06560 - succinyl-CoA:3-ketoacid-CoA transferase, at 1,434,556 to 1,435,194 _RS06560 RR42_RS06565: RR42_RS06565 - metal-binding protein, at 1,435,290 to 1,435,784 _RS06565 RR42_RS06570: RR42_RS06570 - 3-hydroxybutyrate dehydrogenase, at 1,435,799 to 1,436,575 _RS06570 RR42_RS06575: RR42_RS06575 - alpha/beta hydrolase, at 1,436,778 to 1,437,665 _RS06575 RR42_RS06580: RR42_RS06580 - aminoacrylate peracid reductase, at 1,437,728 to 1,438,090 _RS06580
Group Condition RR42_RS06560 RR42_RS06565 RR42_RS06570 RR42_RS06575 RR42_RS06580
lb LB N.D. -1.3 -0.0 -1.0 -1.6
stress R2A with sodium fluoride 100 mM N.D. -1.3 +0.3 -1.3 -1.7
stress R2A with Doxycycline hyclate 0.0001 mg/ml N.D. +0.3 +0.8 -1.7 -3.0
stress R2A with Cobalt chloride 0.3 mM N.D. +0.2 +0.2 -1.3 -2.4
carbon source adipate (C) N.D. -1.0 -0.8 -0.3 -0.6
stress R2A with Cobalt chloride 0.5 mM N.D. -1.0 -0.1 -0.2 -1.4
stress R2A with Chlorite 4 mM N.D. +0.0 -0.1 -0.9 -1.6
carbon source 4-Hydroxybenzoic Acid (C) N.D. -1.2 -0.2 -0.6 -0.1
carbon source propionate (C) N.D. -0.6 -0.5 -0.3 -0.7
stress R2A with Nickel (II) chloride 0.35 mM N.D. -0.6 -0.1 -0.2 -0.7
carbon source D-Gluconic Acid (C) N.D. +0.2 +0.0 -0.7 -1.2
nitrogen source L-Threonine (N) N.D. +0.2 -0.2 -0.7 -1.0
carbon source Protocatechuic Acid (C) N.D. -0.5 +0.1 -0.4 -0.9
carbon source L-Asparagine (C) N.D. +0.1 -0.9 -0.4 -0.5
stress R2A with Chloride 300 mM N.D. -1.0 -0.2 -0.6 +0.3
stress R2A with Chlorite 4 mM N.D. +0.1 +0.2 -0.9 -1.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.6 -0.5 -0.7 -1.0
stress R2A with Zinc 0.1 mM N.D. -0.6 -1.1 -0.0 +0.3
carbon source D,L-Lactate (C) N.D. -0.9 -0.6 +0.1 +0.3
stress R2A with Nickel (II) chloride 0.5 mM N.D. -0.4 +0.6 -0.6 -0.7
carbon source Azelaic (C) N.D. +0.3 -0.2 -0.5 -0.5
stress R2A with D-Cycloserine 0.5 mg/ml N.D. +0.7 -0.1 -0.5 -0.8
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. -0.8 +0.8 -0.7 +0.1
carbon source Protocatechuic Acid (C) N.D. -0.3 +0.9 -0.4 -0.7
carbon source Ethanol (C) N.D. -0.6 +0.1 -0.5 +0.5
stress R2A with Lomefloxacin 0.001 mM N.D. +0.8 -0.7 +0.3 -0.1
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate N.D. -0.6 +0.4 +0.3 +0.5
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL N.D. +0.8 -0.1 -0.2 +0.5
nitrogen source L-Valine (N) N.D. +0.4 -0.1 +0.2 +0.9
stress R2A with Vancomycin 0.5 mg/ml N.D. +0.2 +0.5 +0.4 +0.6
remove
RR42_RS06560
plot		 remove
RR42_RS06565
plot		 remove
RR42_RS06570		 remove
RR42_RS06575
plot		 remove
RR42_RS06580
plot