Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS06385 and RR42_RS06390 are separated by 177 nucleotidesRR42_RS06390 and RR42_RS06395 are separated by 45 nucleotidesRR42_RS06395 and RR42_RS06400 are separated by 208 nucleotidesRR42_RS06400 and RR42_RS06405 overlap by 4 nucleotides RR42_RS06385: RR42_RS06385 - N-ethylmaleimide reductase, at 1,399,546 to 1,400,658 _RS06385 RR42_RS06390: RR42_RS06390 - LysR family transcriptional regulator, at 1,400,836 to 1,401,759 _RS06390 RR42_RS06395: RR42_RS06395 - TetR family transcriptional regulator, at 1,401,805 to 1,402,401 _RS06395 RR42_RS06400: RR42_RS06400 - acetate permease, at 1,402,610 to 1,404,250 _RS06400 RR42_RS06405: RR42_RS06405 - membrane protein, at 1,404,247 to 1,404,609 _RS06405
Group Condition RR42_RS06385 RR42_RS06390 RR42_RS06395 RR42_RS06400 RR42_RS06405
carbon source Pimelic (C) +0.1 +0.1 -6.0 +0.1 +0.7
carbon source Pimelic (C) +0.3 -0.1 -4.9 -0.1 +0.2
carbon source adipate (C) +0.0 -0.0 -4.0 +0.1 +0.0
carbon source adipate (C) +0.2 -0.2 -3.2 -0.3 -0.2
carbon source Disodium Glutarate (C) +0.2 +0.1 -2.8 +0.1 -0.6
carbon source Disodium Glutarate (C) +0.1 +0.0 -3.0 +0.0 -0.0
stress R2A with Vancomycin 0.5 mg/ml -0.5 -0.4 -0.4 +0.1 -0.9
stress R2A with Vancomycin 0.5 mg/ml -0.2 -0.4 -0.4 -0.0 -1.0
carbon source Protocatechuic Acid (C) +0.3 -0.1 -0.9 +0.2 -1.4
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.4 -0.6 -0.5 +0.3 -0.6
stress R2A with Cobalt chloride 0.5 mM +0.1 +0.1 -0.5 -0.0 -1.4
carbon source D-Fructose (C) -0.1 -0.6 -0.1 +0.1 -0.8
carbon source a-Ketoglutaric (C) +0.2 -0.1 -0.7 +0.1 -0.8
nitrogen source L-Tryptophan (N) +0.0 -0.2 -1.1 -0.1 +0.1
nitrogen source D-Alanine (N) -0.1 -0.3 -0.9 -0.1 +0.2
nitrogen source L-Tryptophan (N) -0.1 -0.4 -1.4 +0.0 +0.7
stress R2A with Nickel (II) chloride 0.5 mM +0.1 -0.5 -0.8 -0.2 +0.4
stress R2A with Lomefloxacin 0.001 mM +0.1 +0.1 -1.3 +0.0 +0.1
stress R2A with Cisplatin 0.001 mg/ml +0.2 -0.3 -0.3 +0.2 -0.5
stress R2A with Paraquat dichloride 0.064 mg/ml +0.2 -0.1 -0.8 -0.4 +0.4
carbon source Protocatechuic Acid (C) +0.3 +0.3 -1.5 +0.2 +0.3
carbon source Suberic (C) +0.1 -0.3 -0.6 +0.1 +0.4
carbon source Carbon source Phenylacetic 2.5 mM -0.1 -0.3 +0.5 +0.2 -0.5
carbon source Trisodium citrate (C) +0.3 +0.2 -0.7 +0.1 -0.3
stress R2A with Sisomicin 0.035 mg/ml +0.5 -0.0 -0.6 +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.2 +0.8 +0.0 -0.3
stress R2A with A22 0.01 mg/ml +0.1 -0.1 +1.1 -0.0 +0.2
stress R2A with Chlorite 4 mM +0.2 -0.2 +1.2 +0.1 -0.1
lb LB -0.0 +0.4 +0.6 -0.0 +0.6
stress R2A with Chlorite 4 mM +0.3 -0.0 +1.6 -0.1 +0.1
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