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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS06220 and RR42_RS06225 are separated by 221 nucleotides
RR42_RS06225 and RR42_RS06230 are separated by 141 nucleotides
RR42_RS06230 and RR42_RS06235 are separated by 48 nucleotides
RR42_RS06235 and RR42_RS06240 are separated by 83 nucleotides
RR42_RS06220: RR42_RS06220 - ferredoxin-NADP reductase, at 1,365,411 to 1,366,517
_RS06220
RR42_RS06225: RR42_RS06225 - phosphoesterase, at 1,366,739 to 1,367,584
_RS06225
RR42_RS06230: RR42_RS06230 - hypothetical protein, at 1,367,726 to 1,368,349
_RS06230
RR42_RS06235: RR42_RS06235 - peptidase M50, at 1,368,398 to 1,369,063
_RS06235
RR42_RS06240: RR42_RS06240 - tryptophan--tRNA ligase, at 1,369,147 to 1,370,349
_RS06240
Group
Condition
RR42
_RS06220
RR42
_RS06225
RR42
_RS06230
RR42
_RS06235
RR42
_RS06240
carbon source
adipate (C)
-0.9
+0.4
-0.8
-0.5
-2.0
carbon source
Azelaic (C)
+0.0
-0.3
-0.6
-0.5
-2.5
carbon source
Dodecandioic (C)
-0.1
-0.5
+0.1
-0.4
-2.9
carbon source
Octanoic (C)
+0.1
-1.5
+0.4
-0.8
-2.0
carbon source
succinate (C)
-0.1
-0.1
-0.1
-0.6
-2.7
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-3.5
-0.1
-0.0
+0.4
-0.2
carbon source
Heptanoic (C)
+0.1
-0.8
+0.4
-0.2
-2.8
carbon source
adipate (C)
-1.1
-0.0
-0.1
-0.6
-1.2
carbon source
Hexanoic (C)
-0.3
-0.5
-0.3
-0.1
-1.8
carbon source
propionate (C)
-0.1
-0.2
-0.0
-0.5
-2.1
carbon source
Valeric (C)
-0.1
-0.7
-0.8
-0.3
-1.0
stress
R2A with Nickel (II) chloride 0.25 mM
-0.1
+0.1
-0.1
-0.3
-2.5
carbon source
Carbon source D,L-Lactate 10 mM
+0.0
+0.2
+0.1
+0.2
-3.0
nitrogen source
L-Glutamine (N)
-0.1
+0.4
-0.4
-0.0
-2.4
carbon source
Carbon source Phenylacetic 2.5 mM
-0.1
-0.8
-0.3
+0.4
-1.7
carbon source
L-Asparagine (C)
-0.0
-0.2
-0.2
+0.2
-2.2
carbon source
Dodecandioic (C)
+0.1
-0.3
-0.2
-0.0
-2.0
carbon source
succinate (C)
+0.2
-0.1
-0.2
-0.4
-1.8
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.6
-0.7
-0.2
+0.2
-1.0
stress
R2A with Zinc 0.1 mM
+0.3
-0.6
-0.0
-0.2
-1.6
carbon source
Carbon source Phenylacetic 2.5 mM
-0.1
-0.5
-0.1
+0.3
-1.5
carbon source
Disodium Glutarate (C)
-0.3
+0.7
-0.5
-0.2
-1.3
stress
R2A with Cisplatin 0.001 mg/ml
-0.3
+0.4
+0.8
-0.1
-2.1
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.1
-1.1
-0.3
-0.3
+1.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.1
-1.0
-0.5
-0.2
+1.0
stress
R2A with Cobalt chloride 0.3 mM
+0.6
+0.8
+0.2
+0.2
-2.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.0
-1.0
+0.6
-0.4
+0.8
stress
R2A with Cobalt chloride 0.5 mM
+0.7
+1.0
+0.2
+0.4
-2.2
stress
R2A with Nickel (II) chloride 0.5 mM
+0.5
+0.8
+0.1
-0.4
+1.0
stress
R2A with Nickel (II) chloride 0.35 mM
+0.4
+0.6
-0.4
+0.6
+1.6
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