Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS06010 and RR42_RS06015 are separated by 48 nucleotidesRR42_RS06015 and RR42_RS06020 are separated by 80 nucleotidesRR42_RS06020 and RR42_RS06025 are separated by 68 nucleotidesRR42_RS06025 and RR42_RS06030 are separated by 62 nucleotides RR42_RS06010: RR42_RS06010 - phosphotyrosine protein phosphatase, at 1,321,244 to 1,321,735 _RS06010 RR42_RS06015: RR42_RS06015 - recombinase, at 1,321,784 to 1,323,874 _RS06015 RR42_RS06020: RR42_RS06020 - Fe-S cluster assembly transcriptional regulator IscR, at 1,323,955 to 1,324,509 _RS06020 RR42_RS06025: RR42_RS06025 - cysteine desulfurase, at 1,324,578 to 1,325,795 _RS06025 RR42_RS06030: RR42_RS06030 - Fe-S cluster assembly scaffold IscU, at 1,325,858 to 1,326,259 _RS06030
Group Condition RR42_RS06010 RR42_RS06015 RR42_RS06020 RR42_RS06025 RR42_RS06030
carbon source Octanoic (C) -1.0 -5.7 -0.8 N.D. N.D.
carbon source Octanoic (C) -0.2 -5.3 -0.8 N.D. N.D.
stress R2A with Nickel (II) chloride 0.25 mM -0.2 +0.0 -5.3 N.D. N.D.
stress R2A with Cobalt chloride 0.3 mM -0.0 +0.2 -5.3 N.D. N.D.
carbon source Protocatechuic Acid (C) -2.3 -2.8 +0.7 N.D. N.D.
stress R2A with Nickel (II) chloride 0.35 mM -0.8 -0.2 -3.4 N.D. N.D.
stress R2A with Cobalt chloride 0.5 mM -0.7 -0.0 -3.7 N.D. N.D.
nitrogen source nitrate (N) -0.7 -1.1 -2.4 N.D. N.D.
nitrogen source D-Alanine (N) -0.7 -0.9 -1.7 N.D. N.D.
carbon source Heptanoic (C) -0.5 -1.0 -1.6 N.D. N.D.
carbon source a-Ketoglutaric (C) -0.5 -0.9 -1.5 N.D. N.D.
carbon source Protocatechuic Acid (C) -1.4 -1.4 -0.1 N.D. N.D.
stress R2A with Vancomycin 0.5 mg/ml -0.1 -0.2 -2.5 N.D. N.D.
carbon source L-Asparagine (C) -0.4 -0.2 -2.2 N.D. N.D.
nitrogen source L-Tryptophan (N) -0.3 -0.8 -1.7 N.D. N.D.
stress R2A with Cisplatin 0.001 mg/ml +0.1 -0.2 -2.6 N.D. N.D.
carbon source propionate (C) -0.3 -0.5 -1.9 N.D. N.D.
stress R2A with Nickel (II) chloride 0.5 mM -0.0 -0.0 -2.5 N.D. N.D.
stress R2A with Nickel (II) chloride 0.35 mM -0.2 -0.1 -2.4 N.D. N.D.
nitrogen source Glycine (N) -0.0 -1.0 -1.6 N.D. N.D.
nitrogen source L-Phenylalanine (N) -0.2 -0.3 -2.1 N.D. N.D.
carbon source D-Lactate (C) +0.1 -0.8 -1.8 N.D. N.D.
carbon source D,L-Lactate (C) -0.8 -0.9 -0.7 N.D. N.D.
stress R2A with Nickel (II) chloride 0.25 mM -0.4 +0.1 -2.1 N.D. N.D.
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.2 +0.6 -2.6 N.D. N.D.
nitrogen source L-Tryptophan (N) -0.7 -1.1 +0.7 N.D. N.D.
nitrogen source D-Alanine (N) -0.6 -0.9 +1.2 N.D. N.D.
nitrogen source nitrite (N) -0.6 -0.7 +1.2 N.D. N.D.
nitrogen source L-Asparagine (N) +0.1 -0.9 +1.4 N.D. N.D.
stress R2A with Lomefloxacin 0.001 mM -0.0 -0.3 +2.4 N.D. N.D.
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