Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS05990 and RR42_RS05995 are separated by 157 nucleotides
RR42_RS05995 and RR42_RS06000 are separated by 100 nucleotides
RR42_RS06000 and RR42_RS06005 are separated by 13 nucleotides
RR42_RS06005 and RR42_RS06010 are separated by 213 nucleotides
RR42_RS05990: RR42_RS05990 - aromatic amino acid aminotransferase, at 1,316,825 to 1,318,021
_RS05990
RR42_RS05995: RR42_RS05995 - excinuclease ABC subunit B, at 1,318,179 to 1,320,281
_RS05995
RR42_RS06000: RR42_RS06000 - antibiotic biosynthesis monooxygenase, at 1,320,382 to 1,320,681
_RS06000
RR42_RS06005: RR42_RS06005 - hypothetical protein, at 1,320,695 to 1,321,030
_RS06005
RR42_RS06010: RR42_RS06010 - phosphotyrosine protein phosphatase, at 1,321,244 to 1,321,735
_RS06010
Group
Condition
RR42
_RS05990
RR42
_RS05995
RR42
_RS06000
RR42
_RS06005
RR42
_RS06010
carbon source
Azelaic (C)
-4.7
-0.2
-1.5
N.D.
-0.5
carbon source
Dodecandioic (C)
-4.3
-0.2
-1.8
N.D.
-0.3
carbon source
Dodecandioic (C)
-6.1
-0.2
+0.6
N.D.
-0.8
carbon source
Octanoic (C)
-5.2
-0.5
+0.7
N.D.
-1.0
carbon source
Heptanoic (C)
-5.7
-0.2
+0.6
N.D.
-0.6
carbon source
Valeric (C)
-5.3
-0.2
+0.1
N.D.
-0.5
stress
R2A with Cisplatin 0.001 mg/ml
+0.1
-4.4
-1.6
N.D.
+0.1
carbon source
Valeric (C)
-4.9
-0.4
+0.0
N.D.
-0.3
carbon source
D,L-Lactate (C)
-4.4
-0.3
-0.1
N.D.
-0.8
carbon source
Heptanoic (C)
-5.0
-0.0
+0.3
N.D.
-0.5
carbon source
Suberic (C)
-4.3
-0.3
+0.0
N.D.
-0.6
nitrogen source
L-Threonine (N)
-4.2
-0.1
-0.2
N.D.
-0.5
carbon source
propionate (C)
-4.7
-0.4
+0.9
N.D.
-0.7
carbon source
Octanoic (C)
-5.1
-0.3
+0.8
N.D.
-0.2
carbon source
4-Hydroxybenzoic Acid (C)
-4.1
-0.3
+0.2
N.D.
-0.5
carbon source
Hexanoic (C)
-4.1
-0.2
+0.4
N.D.
-0.6
carbon source
succinate (C)
-3.6
-0.4
+0.0
N.D.
-0.5
stress
R2A with Cisplatin 0.001 mg/ml
+0.1
-3.7
-0.6
N.D.
-0.3
carbon source
L-Malic (C)
-4.4
-0.0
+0.6
N.D.
-0.6
nitrogen source
L-Glutamine (N)
-3.9
+0.0
-0.6
N.D.
+0.1
nitrogen source
nitrite (N)
-3.5
-0.6
+0.4
N.D.
-0.6
carbon source
Hexanoic (C)
-4.2
-0.1
+0.5
N.D.
-0.2
carbon source
propionate (C)
-4.0
-0.1
+0.4
N.D.
-0.3
carbon source
succinate (C)
-3.9
-0.2
+0.6
N.D.
-0.3
carbon source
succinate (C)
-4.2
-0.2
+1.1
N.D.
-0.5
carbon source
propionate (C)
-4.1
-0.1
+0.4
N.D.
+0.0
carbon source
Suberic (C)
-3.4
-0.4
+0.5
N.D.
-0.3
carbon source
Protocatechuic Acid (C)
-2.0
+0.8
+0.4
N.D.
-2.3
carbon source
adipate (C)
-2.7
-1.0
+0.9
N.D.
-0.1
carbon source
Protocatechuic Acid (C)
-2.8
+1.0
+1.5
N.D.
-1.4
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