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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS05785 and RR42_RS05790 are separated by 82 nucleotides
RR42_RS05790 and RR42_RS05795 are separated by 370 nucleotides
RR42_RS05795 and RR42_RS05800 are separated by 12 nucleotides
RR42_RS05800 and RR42_RS05805 are separated by 169 nucleotides
RR42_RS05785: RR42_RS05785 - hypothetical protein, at 1,272,242 to 1,273,384
_RS05785
RR42_RS05790: RR42_RS05790 - lipoprotein, at 1,273,467 to 1,274,243
_RS05790
RR42_RS05795: RR42_RS05795 - N-formylglutamate amidohydrolase, at 1,274,614 to 1,275,486
_RS05795
RR42_RS05800: RR42_RS05800 - ABC transporter substrate-binding protein, at 1,275,499 to 1,276,485
_RS05800
RR42_RS05805: RR42_RS05805 - LysR family transcriptional regulator, at 1,276,655 to 1,277,557
_RS05805
Group
Condition
RR42
_RS05785
RR42
_RS05790
RR42
_RS05795
RR42
_RS05800
RR42
_RS05805
stress
R2A with Vancomycin 0.5 mg/ml
-0.2
-2.7
-0.0
-0.0
-0.6
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
-2.0
-0.1
-0.3
-0.3
stress
R2A with Chloride 300 mM
-0.1
-2.0
-0.1
-0.0
-0.1
stress
R2A with nitrate 200 mM
-0.0
-2.3
+0.2
-0.1
+0.0
stress
R2A with Cisplatin 0.001 mg/ml
-0.0
-0.5
-0.3
-0.3
-0.6
stress
R2A with Vancomycin 0.5 mg/ml
-0.2
-0.9
-0.3
-0.1
-0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.0
-0.8
-0.1
-0.2
-0.3
nitrogen source
L-Serine (N)
-0.3
-0.3
-0.4
+0.1
-0.4
temperature
R2A 23C
-0.1
-0.1
-0.1
-0.5
-0.4
stress
R2A with Chloride 300 mM
-0.0
-1.2
+0.0
-0.1
+0.2
stress
R2A with nitrate 150 mM
+0.1
-1.1
+0.2
-0.2
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.3
-0.5
+0.1
-0.1
-0.6
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.3
-0.1
-0.6
+0.1
-0.4
nitrogen source
L-Leucine (N)
-0.0
-0.6
-0.2
-0.2
+0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
-0.4
+0.4
-0.2
-0.1
stress
R2A with nitrate 200 mM
-0.1
-0.7
+0.2
-0.1
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
+0.0
-0.3
+0.1
-0.5
+0.4
carbon source
Protocatechuic Acid (C)
+0.1
-0.7
-0.1
+0.3
+0.3
carbon source
Protocatechuic Acid (C)
-0.1
-0.5
-0.3
+0.2
+0.5
stress
R2A with Nickel (II) chloride 0.35 mM
-0.0
-0.5
+0.1
+0.0
+0.5
carbon source
Carbon source D,L-Lactate 10 mM
+0.2
+0.1
-0.1
-0.2
+0.7
stress
R2A with Cobalt chloride 0.3 mM
+0.1
+0.7
+0.2
-0.5
+0.2
stress
R2A with Lomefloxacin 0.001 mM
-0.1
+1.0
+0.1
-0.0
-0.3
carbon source
Hexanoic (C)
+0.2
+0.8
-0.2
+0.2
-0.1
temperature
R2A 37C
+0.0
+1.1
-0.1
+0.1
-0.2
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.0
+1.3
+0.1
-0.5
+0.0
stress
R2A with Cisplatin 0.001 mg/ml
-0.1
+0.7
-0.1
+0.3
+0.1
carbon source
adipate (C)
-0.0
+0.6
-0.0
+0.2
+0.5
carbon source
Octanoic (C)
+0.1
+1.0
-0.0
+0.2
+0.0
lb
LB
+0.3
+0.9
+0.0
-0.1
+0.8
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RR42_RS05795
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