Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS05660 and RR42_RS05665 are separated by 44 nucleotidesRR42_RS05665 and RR42_RS05670 are separated by 28 nucleotidesRR42_RS05670 and RR42_RS05675 overlap by 1 nucleotidesRR42_RS05675 and RR42_RS05680 are separated by 9 nucleotides RR42_RS05660: RR42_RS05660 - urease subunit gamma, at 1,246,584 to 1,246,886 _RS05660 RR42_RS05665: RR42_RS05665 - urease accessory protein UreJ, at 1,246,931 to 1,247,563 _RS05665 RR42_RS05670: RR42_RS05670 - urease subunit beta, at 1,247,592 to 1,247,897 _RS05670 RR42_RS05675: RR42_RS05675 - urease subunit alpha, at 1,247,897 to 1,249,615 _RS05675 RR42_RS05680: RR42_RS05680 - urease accessory protein UreE, at 1,249,625 to 1,250,260 _RS05680
Group Condition RR42_RS05660 RR42_RS05665 RR42_RS05670 RR42_RS05675 RR42_RS05680
carbon source Protocatechuic Acid (C) N.D. -1.2 -2.2 -0.1 -0.2
stress R2A with Nickel (II) chloride 0.35 mM N.D. -2.7 +0.4 -0.3 -0.4
carbon source Suberic (C) N.D. -2.0 -0.6 +0.0 -0.2
carbon source pyruvate (C) N.D. -2.2 -0.2 -0.1 +0.0
nitrogen source nitrite (N) N.D. -1.3 -0.5 -0.0 -0.4
nitrogen source casaminos (N) N.D. -0.5 -1.0 -0.4 -0.2
nitrogen source L-Leucine (N) N.D. -1.1 -0.6 +0.0 -0.4
carbon source adipate (C) N.D. -0.4 -1.4 -0.1 +0.1
carbon source D-Fructose (C) N.D. -0.8 -0.9 -0.0 +0.1
carbon source L-Leucine (C) N.D. -0.5 -1.1 -0.2 +0.2
carbon source Azelaic (C) N.D. +0.2 -1.3 -0.6 +0.1
carbon source L-Malic (C) N.D. -1.1 -0.4 -0.2 +0.1
carbon source Suberic (C) N.D. -0.6 -0.8 -0.3 +0.2
stress R2A with D-Cycloserine 0.5 mg/ml N.D. +0.8 -2.0 -0.3 +0.1
lb LB N.D. -1.6 +0.2 +0.1 -0.0
carbon source Protocatechuic Acid (C) N.D. -1.4 -1.6 +0.6 +1.0
carbon source Pimelic (C) N.D. -0.8 -0.4 -0.4 +0.2
stress R2A with A22 0.01 mg/ml N.D. -1.1 +0.4 +0.0 -0.4
carbon source L-Alanine (C) N.D. -1.2 +0.6 -0.1 +0.0
stress R2A with Cisplatin 0.001 mg/ml N.D. -1.4 +0.7 -0.0 +0.1
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate N.D. -1.0 +1.0 -0.3 -0.1
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. -0.7 +0.3 -0.4 +0.4
stress R2A with Nickel (II) chloride 0.25 mM N.D. +1.0 -0.6 +0.1 -0.5
carbon source Carbon source Phenylacetic 2.5 mM N.D. +0.8 +0.7 -0.0 -0.5
stress R2A with Vancomycin 0.5 mg/ml N.D. +1.1 -1.0 +0.4 +0.6
carbon source L-Histidine (C) N.D. +1.2 +0.4 -0.2 -0.1
carbon source L-Asparagine (C) N.D. +0.9 +0.7 -0.1 +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM N.D. +0.2 +1.1 +0.2 +0.2
stress R2A with Bacitracin 0.5 mg/ml N.D. +0.7 +0.5 +0.2 +0.6
stress R2A with Lomefloxacin 0.001 mM N.D. +1.2 +0.4 +0.6 +0.6
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