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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS05310 and RR42_RS05315 are separated by 218 nucleotides
RR42_RS05315 and RR42_RS05320 are separated by 170 nucleotides
RR42_RS05320 and RR42_RS05325 are separated by 63 nucleotides
RR42_RS05325 and RR42_RS05330 overlap by 4 nucleotides
RR42_RS05310: RR42_RS05310 - hypothetical protein, at 1,173,512 to 1,173,940
_RS05310
RR42_RS05315: RR42_RS05315 - fatty acid desaturase, at 1,174,159 to 1,175,259
_RS05315
RR42_RS05320: RR42_RS05320 - guanine deaminase, at 1,175,430 to 1,176,761
_RS05320
RR42_RS05325: RR42_RS05325 - adenine deaminase, at 1,176,825 to 1,177,871
_RS05325
RR42_RS05330: RR42_RS05330 - xanthine dehydrogenase, at 1,177,868 to 1,178,902
_RS05330
Group
Condition
RR42
_RS05310
RR42
_RS05315
RR42
_RS05320
RR42
_RS05325
RR42
_RS05330
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.4
-0.4
-2.0
-5.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-0.2
-0.0
-1.7
-4.2
temperature
R2A 23C
-0.3
-0.6
-0.3
-0.6
-0.8
stress
R2A with Nickel (II) chloride 0.35 mM
-1.6
-0.7
-0.4
+0.3
-0.2
temperature
R2A 23C
-0.2
-0.3
-0.5
-0.8
-0.6
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
+0.3
+0.2
-0.6
-2.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.3
+0.1
-0.5
-0.3
-1.3
carbon source
Suberic (C)
-1.0
-0.1
-0.5
-0.0
-0.5
nitrogen source
Glucuronamide (N)
-0.6
-0.6
-0.0
-0.2
-0.5
nitrogen source
casaminos (N)
-0.1
-0.7
-0.5
-0.1
-0.4
stress
R2A with Zinc 0.1 mM
-0.4
-0.7
-0.3
-0.4
-0.0
r2a
R2A
-0.3
-0.3
-0.5
-0.2
-0.5
stress
R2A with nitrate 200 mM
-0.4
-0.3
-0.3
-0.3
-0.2
carbon source
Azelaic (C)
-0.7
-0.2
+0.0
+0.1
-0.8
carbon source
D-Gluconic Acid (C)
-0.7
+0.1
+0.1
-0.7
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.7
+0.3
+0.0
-0.3
-1.7
nitrogen source
L-Glutamine (N)
-0.9
-0.2
-0.2
+0.2
+0.4
carbon source
Octanoic (C)
+0.3
-0.1
-0.0
+0.3
-0.9
nitrogen source
Glycine (N)
+0.5
-0.1
+0.3
+0.1
-1.0
nitrogen source
L-Isoleucine (N)
-0.6
+0.4
+0.0
-0.2
+0.4
lb
LB
+0.6
+0.0
+0.4
-0.1
-0.8
stress
R2A with Cobalt chloride 0.3 mM
+0.2
-0.2
+0.1
+1.0
+0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.5
+0.3
-0.1
+0.1
+0.8
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
+0.3
+0.8
+0.6
+0.4
-0.1
stress
R2A with nitrate 150 mM
+0.2
+0.5
+0.2
+0.3
+0.7
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.3
+0.8
+0.5
+0.5
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.5
+0.2
+0.3
+0.9
+0.2
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.4
+0.7
+0.5
+0.6
+0.4
stress
R2A with Nickel (II) chloride 0.5 mM
+0.1
+0.7
+0.7
+1.4
+0.1
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.8
+1.2
+0.4
+0.5
+0.8
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RR42_RS05320
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