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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS05275 and RR42_RS05280 are separated by 239 nucleotides
RR42_RS05280 and RR42_RS05285 are separated by 44 nucleotides
RR42_RS05285 and RR42_RS05290 are separated by 328 nucleotides
RR42_RS05290 and RR42_RS05295 are separated by 154 nucleotides
RR42_RS05275: RR42_RS05275 - membrane protein, at 1,163,903 to 1,165,108
_RS05275
RR42_RS05280: RR42_RS05280 - cytochrome C, at 1,165,348 to 1,165,965
_RS05280
RR42_RS05285: RR42_RS05285 - quinonprotein alcohol dehydrogenase, at 1,166,010 to 1,167,758
_RS05285
RR42_RS05290: RR42_RS05290 - ankyrin, at 1,168,087 to 1,168,701
_RS05290
RR42_RS05295: RR42_RS05295 - hypothetical protein, at 1,168,856 to 1,169,866
_RS05295
Group
Condition
RR42
_RS05275
RR42
_RS05280
RR42
_RS05285
RR42
_RS05290
RR42
_RS05295
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-3.5
+0.1
-0.0
-0.4
-0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.4
-0.4
-0.6
-0.9
-1.0
stress
R2A with nitrate 200 mM
-0.3
-0.3
-0.4
-0.9
-0.6
r2a
R2A
-0.3
-0.1
-0.4
-1.1
-0.5
stress
R2A with Chloride 300 mM
-0.1
-0.6
-0.0
-1.4
-0.1
stress
R2A with Zinc 0.1 mM
-0.1
-0.2
-0.3
-1.2
-0.3
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.2
-0.5
-0.5
-0.7
-0.2
nitrogen source
Glucuronamide (N)
-0.1
-0.4
-0.5
-0.8
-0.3
stress
R2A with Cobalt chloride 0.5 mM
-0.1
-0.4
-0.5
-0.2
-0.7
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-3.0
-0.0
+0.4
+0.5
+0.2
nitrogen source
casaminos (N)
-0.2
-0.4
-0.5
-0.3
-0.4
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.1
-0.2
-0.4
-1.1
-0.3
stress
R2A with Cephalothin 0.25 mg/ml
-0.1
-0.2
-0.2
-0.9
-0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-1.5
+0.2
-0.3
-0.7
+0.6
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
-0.0
-0.1
-1.4
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-2.0
+0.2
+0.2
-0.1
+0.1
r2a
R2A
-0.1
+0.2
-0.2
-1.1
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-1.6
+0.4
+0.6
-0.8
+0.4
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.0
+0.2
+0.3
-1.6
+0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.0
+0.5
+0.3
-1.4
-0.2
stress
R2A with nitrate 200 mM
+0.2
+0.4
+0.2
-0.8
+0.3
r2a
R2A
+0.3
+0.4
+0.3
-0.3
+0.5
lb
LB
+0.2
+0.5
+0.7
+0.1
-0.2
carbon source
Protocatechuic Acid (C)
+0.2
+0.8
-0.3
+0.9
-0.0
nitrogen source
L-Glutamine (N)
+0.0
+0.4
-0.0
+1.3
+0.2
temperature
R2A 37C
+0.3
+0.6
+0.2
+0.8
+0.2
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.2
+0.4
+0.4
+0.7
+0.6
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
+0.2
-0.0
+0.5
+0.9
+0.8
stress
R2A with Cisplatin 0.001 mg/ml
+0.5
+0.5
+0.2
+0.7
+0.6
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.4
+0.4
+0.6
+0.7
+0.8
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RR42_RS05285
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