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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS04960 and RR42_RS04965 are separated by 705 nucleotides
RR42_RS04965 and RR42_RS04970 are separated by 209 nucleotides
RR42_RS04970 and RR42_RS04975 are separated by 88 nucleotides
RR42_RS04975 and RR42_RS04980 are separated by 206 nucleotides
RR42_RS04960: RR42_RS04960 - Fe(II)-dependent oxygenase, at 1,096,205 to 1,096,888
_RS04960
RR42_RS04965: RR42_RS04965 - hypothetical protein, at 1,097,594 to 1,097,905
_RS04965
RR42_RS04970: RR42_RS04970 - aspartyl beta-hydroxylase, at 1,098,115 to 1,099,017
_RS04970
RR42_RS04975: RR42_RS04975 - histidine kinase, at 1,099,106 to 1,100,581
_RS04975
RR42_RS04980: RR42_RS04980 - hypothetical protein, at 1,100,788 to 1,101,189
_RS04980
Group
Condition
RR42
_RS04960
RR42
_RS04965
RR42
_RS04970
RR42
_RS04975
RR42
_RS04980
stress
R2A with Nickel (II) chloride 0.25 mM
-3.3
-0.5
-0.0
+0.1
-0.2
stress
R2A with Nickel (II) chloride 0.5 mM
-3.3
-0.3
-0.2
+0.1
+0.3
stress
R2A with Cobalt chloride 0.3 mM
-1.8
-0.3
-0.0
-0.0
-0.4
stress
R2A with Lomefloxacin 0.001 mM
-0.4
+0.2
-1.3
+0.1
-1.2
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+1.2
+0.2
-3.6
+0.1
-0.3
stress
R2A with Cobalt chloride 0.5 mM
-2.5
-0.1
-0.3
-0.1
+0.6
stress
R2A with Nickel (II) chloride 0.35 mM
-2.7
+0.2
-0.4
+0.3
+0.3
carbon source
Trisodium citrate (C)
-1.5
+0.4
+0.1
+0.2
-1.2
stress
R2A with Chlorite 4 mM
-1.1
+0.5
-0.4
+0.1
-0.9
stress
R2A with Sisomicin 0.035 mg/ml
-0.4
+0.1
-0.6
-0.0
-0.8
stress
R2A with Lomefloxacin 0.00075 mM
+0.0
+0.0
-1.9
-0.3
+0.6
stress
R2A with nitrate 200 mM
-0.7
+0.4
+0.0
-0.0
-1.0
stress
R2A with Nickel (II) chloride 0.25 mM
-1.9
+0.2
-0.1
+0.0
+0.4
carbon source
adipate (C)
-0.2
-0.5
+0.4
-0.2
-0.8
carbon source
Disodium Glutarate (C)
+0.4
-0.7
+0.2
-0.0
-1.1
stress
R2A with Vancomycin 0.5 mg/ml
+0.8
-0.4
-0.9
-0.3
-0.4
stress
R2A with Cisplatin 0.001 mg/ml
-1.4
-0.3
+0.1
-0.0
+0.5
lb
LB
+1.4
-0.4
+0.1
+0.2
-1.9
stress
R2A with nitrate 200 mM
+0.7
-0.4
-0.3
+0.2
-0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.3
-0.4
-0.3
+0.1
+0.8
carbon source
Ethanol (C)
-0.5
+0.7
+0.2
+0.1
-0.5
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+1.1
-0.7
-0.2
-0.0
+0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+1.1
-0.3
-0.1
-0.2
+0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+1.4
-0.1
+0.1
-0.2
-0.4
carbon source
Protocatechuic Acid (C)
-0.8
+0.2
+0.5
+0.3
+0.8
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+1.5
-0.6
+0.1
+0.2
-0.0
stress
R2A with D-Cycloserine 0.5 mg/ml
+2.0
-0.2
-0.2
-0.1
+0.4
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.8
-0.4
+1.7
+0.1
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+3.2
-0.5
+0.0
+0.0
+0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+3.6
+0.3
+0.4
+0.3
+0.3
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