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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS04910 and RR42_RS04915 are separated by 84 nucleotides
RR42_RS04915 and RR42_RS04920 are separated by 257 nucleotides
RR42_RS04920 and RR42_RS04925 are separated by 44 nucleotides
RR42_RS04925 and RR42_RS04930 are separated by 123 nucleotides
RR42_RS04910: RR42_RS04910 - guanylate kinase, at 1,088,828 to 1,089,481
_RS04910
RR42_RS04915: RR42_RS04915 - DNA-directed RNA polymerase subunit omega, at 1,089,566 to 1,089,769
_RS04915
RR42_RS04920: RR42_RS04920 - guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 1,090,027 to 1,092,444
_RS04920
RR42_RS04925: RR42_RS04925 - transcription elongation factor GreB, at 1,092,489 to 1,093,085
_RS04925
RR42_RS04930: RR42_RS04930 - tRNA-Arg, at 1,093,209 to 1,093,285
_RS04930
Group
Condition
RR42
_RS04910
RR42
_RS04915
RR42
_RS04920
RR42
_RS04925
RR42
_RS04930
carbon source
Disodium Glutarate (C)
N.D.
N.D.
N.D.
-0.5
N.D.
nitrogen source
nitrite (N)
N.D.
N.D.
N.D.
-0.5
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
N.D.
N.D.
-0.4
N.D.
carbon source
adipate (C)
N.D.
N.D.
N.D.
-0.4
N.D.
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
N.D.
N.D.
N.D.
-0.3
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
N.D.
+0.2
N.D.
stress
R2A with Sisomicin 0.035 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
L-Leucine (C)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Nickel (II) chloride 0.5 mM
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
L-Histidine (C)
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Chlorite 4 mM
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
Ethanol (C)
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Dimethyl Sulfoxide 5 vol%
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Chlorite 4 mM
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
N.D.
N.D.
N.D.
+0.4
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
N.D.
N.D.
N.D.
+0.4
N.D.
carbon source
pyruvate (C)
N.D.
N.D.
N.D.
+0.4
N.D.
carbon source
Protocatechuic Acid (C)
N.D.
N.D.
N.D.
+0.4
N.D.
stress
R2A with Lomefloxacin 0.001 mM
N.D.
N.D.
N.D.
+0.4
N.D.
stress
R2A with Cisplatin 0.001 mg/ml
N.D.
N.D.
N.D.
+0.5
N.D.
stress
R2A with D-Cycloserine 0.5 mg/ml
N.D.
N.D.
N.D.
+0.6
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
N.D.
N.D.
+0.7
N.D.
carbon source
Protocatechuic Acid (C)
N.D.
N.D.
N.D.
+0.7
N.D.
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