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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS04895 and RR42_RS04900 are separated by 171 nucleotides
RR42_RS04900 and RR42_RS04905 are separated by 178 nucleotides
RR42_RS04905 and RR42_RS04910 are separated by 5 nucleotides
RR42_RS04910 and RR42_RS04915 are separated by 84 nucleotides
RR42_RS04895: RR42_RS04895 - serine/threonine protein phosphatase, at 1,085,564 to 1,086,478
_RS04895
RR42_RS04900: RR42_RS04900 - serine/threonine protein kinase, at 1,086,650 to 1,087,702
_RS04900
RR42_RS04905: RR42_RS04905 - hypothetical protein, at 1,087,881 to 1,088,822
_RS04905
RR42_RS04910: RR42_RS04910 - guanylate kinase, at 1,088,828 to 1,089,481
_RS04910
RR42_RS04915: RR42_RS04915 - DNA-directed RNA polymerase subunit omega, at 1,089,566 to 1,089,769
_RS04915
Group
Condition
RR42
_RS04895
RR42
_RS04900
RR42
_RS04905
RR42
_RS04910
RR42
_RS04915
carbon source
D-Gluconic Acid (C)
-4.8
+0.2
N.D.
N.D.
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
-3.8
-0.1
N.D.
N.D.
N.D.
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-3.8
-0.0
N.D.
N.D.
N.D.
nitrogen source
nitrite (N)
-3.7
+0.0
N.D.
N.D.
N.D.
nitrogen source
nitrate (N)
-2.8
-0.1
N.D.
N.D.
N.D.
nitrogen source
L-Leucine (N)
-2.9
+0.0
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-2.6
-0.0
N.D.
N.D.
N.D.
stress
R2A with Paraquat dichloride 0.064 mg/ml
-2.7
+0.1
N.D.
N.D.
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-2.7
+0.1
N.D.
N.D.
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-2.7
+0.1
N.D.
N.D.
N.D.
nitrogen source
D-Alanine (N)
-2.5
-0.0
N.D.
N.D.
N.D.
nitrogen source
D-Alanine (N)
-2.4
-0.1
N.D.
N.D.
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-2.2
-0.2
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
-2.5
+0.1
N.D.
N.D.
N.D.
nitrogen source
L-Glutamine (N)
-2.3
-0.1
N.D.
N.D.
N.D.
stress
R2A with Bacitracin 0.5 mg/ml
-2.2
-0.0
N.D.
N.D.
N.D.
nitrogen source
L-Serine (N)
-1.9
-0.2
N.D.
N.D.
N.D.
nitrogen source
L-Valine (N)
-2.1
-0.0
N.D.
N.D.
N.D.
nitrogen source
casaminos (N)
-1.8
-0.2
N.D.
N.D.
N.D.
nitrogen source
L-Tryptophan (N)
-2.1
+0.0
N.D.
N.D.
N.D.
nitrogen source
L-Valine (N)
-2.1
+0.0
N.D.
N.D.
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-2.2
+0.2
N.D.
N.D.
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-2.3
+0.3
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-2.0
+0.1
N.D.
N.D.
N.D.
stress
R2A with Lomefloxacin 0.00075 mM
+2.1
+0.1
N.D.
N.D.
N.D.
stress
R2A with Cobalt chloride 0.3 mM
+2.5
-0.2
N.D.
N.D.
N.D.
stress
R2A with Lomefloxacin 0.001 mM
+2.1
+0.3
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
+2.6
+0.1
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
+3.5
-0.3
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.5 mM
+6.7
-0.2
N.D.
N.D.
N.D.
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