Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS04065 and RR42_RS04070 overlap by 4 nucleotidesRR42_RS04070 and RR42_RS04075 are separated by 526 nucleotidesRR42_RS04075 and RR42_RS04080 are separated by 40 nucleotidesRR42_RS04080 and RR42_RS04085 are separated by 138 nucleotides RR42_RS04065: RR42_RS04065 - LysR family transcriptional regulator, at 899,703 to 900,566 _RS04065 RR42_RS04070: RR42_RS04070 - quinone oxidoreductase, at 900,563 to 901,567 _RS04070 RR42_RS04075: RR42_RS04075 - molecular chaperone GroES, at 902,094 to 902,384 _RS04075 RR42_RS04080: RR42_RS04080 - molecular chaperone GroEL, at 902,425 to 904,068 _RS04080 RR42_RS04085: RR42_RS04085 - metallophosphoesterase, at 904,207 to 904,995 _RS04085
Group Condition RR42_RS04065 RR42_RS04070 RR42_RS04075 RR42_RS04080 RR42_RS04085
carbon source Valeric (C) -1.3 -0.2 N.D. N.D. -0.0
carbon source adipate (C) -0.5 -0.4 N.D. N.D. -0.2
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.9 -0.0 N.D. N.D. +0.1
carbon source Azelaic (C) -0.4 -0.3 N.D. N.D. -0.2
lb LB -0.4 +0.2 N.D. N.D. -0.6
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.4 -0.2 N.D. N.D. -0.1
carbon source Pimelic (C) -0.1 -0.3 N.D. N.D. -0.4
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.8 -0.1 N.D. N.D. +0.2
carbon source Valeric (C) -0.3 +0.1 N.D. N.D. -0.5
stress R2A with Nickel (II) chloride 0.35 mM -0.1 -0.7 N.D. N.D. +0.2
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.4 +0.1 N.D. N.D. -0.3
stress R2A with Cisplatin 0.001 mg/ml -0.4 -0.3 N.D. N.D. +0.2
stress R2A with Sisomicin 0.035 mg/ml -0.4 -0.2 N.D. N.D. +0.2
stress R2A with Paraquat dichloride 0.064 mg/ml -0.5 -0.3 N.D. N.D. +0.6
nitrogen source L-Leucine (N) -0.5 +0.1 N.D. N.D. +0.3
carbon source Disodium Glutarate (C) +0.5 -0.3 N.D. N.D. -0.4
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.3 -0.3 N.D. N.D. -0.1
r2a R2A +0.4 -0.2 N.D. N.D. -0.2
carbon source succinate (C) +0.5 +0.1 N.D. N.D. -0.2
carbon source Protocatechuic Acid (C) +0.7 -0.0 N.D. N.D. -0.2
carbon source L-Phenylalanine (C) +0.5 +0.1 N.D. N.D. -0.1
stress R2A with Lomefloxacin 0.001 mM +0.7 -0.0 N.D. N.D. -0.1
stress R2A with Cobalt chloride 0.5 mM +0.4 -0.2 N.D. N.D. +0.3
carbon source Carbon source D,L-Lactate 10 mM +0.6 +0.1 N.D. N.D. -0.1
nitrogen source nitrite (N) +0.7 -0.1 N.D. N.D. +0.1
temperature R2A 23C +0.6 +0.1 N.D. N.D. +0.1
nitrogen source L-Valine (N) +0.6 -0.1 N.D. N.D. +0.3
carbon source a-Ketoglutaric (C) +0.4 +0.1 N.D. N.D. +0.3
temperature R2A 37C +0.7 +0.3 N.D. N.D. +0.0
nitrogen source L-Glutamine (N) +0.6 +0.3 N.D. N.D. +0.1
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