Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS03885 and RR42_RS03890 overlap by 8 nucleotidesRR42_RS03890 and RR42_RS03895 overlap by 4 nucleotidesRR42_RS03895 and RR42_RS03900 are separated by 29 nucleotidesRR42_RS03900 and RR42_RS03905 are separated by 124 nucleotides RR42_RS03885: RR42_RS03885 - mammalian cell entry protein, at 856,680 to 858,311 _RS03885 RR42_RS03890: RR42_RS03890 - paraquat-inducible protein A, at 858,304 to 859,038 _RS03890 RR42_RS03895: RR42_RS03895 - paraquat-inducible protein A, at 859,035 to 859,667 _RS03895 RR42_RS03900: RR42_RS03900 - membrane protein, at 859,697 to 860,821 _RS03900 RR42_RS03905: RR42_RS03905 - hypothetical protein, at 860,946 to 861,863 _RS03905
Group Condition RR42_RS03885 RR42_RS03890 RR42_RS03895 RR42_RS03900 RR42_RS03905
stress R2A with nitrate 150 mM -1.7 -2.1 -1.9 -0.6 -0.1
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.4 -1.4 -1.0 -0.3 -0.2
stress R2A with nitrate 200 mM -0.8 -0.5 -1.3 -0.4 +0.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.6 -0.8 -0.7 -0.1 -0.6
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL -0.1 -0.8 -0.2 -0.8 -0.3
stress R2A with Lomefloxacin 0.001 mM -0.7 -0.4 -0.8 +0.0 -0.2
stress R2A with Lomefloxacin 0.00075 mM -0.3 -0.5 -1.1 -0.5 +0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.4 -0.4 -0.7 +0.0 -0.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.1 +0.0 -0.7 -0.3 -0.6
stress R2A with Zinc 0.1 mM -0.1 -0.2 -1.2 -0.4 +0.3
nitrogen source Glycine (N) -0.7 -0.0 -0.4 -0.4 -0.0
carbon source Protocatechuic Acid (C) -0.1 +0.4 -1.4 -0.3 +0.0
carbon source Heptanoic (C) -0.3 -0.2 -0.8 -0.2 +0.1
carbon source Ethanol (C) -0.1 -0.5 -0.6 +0.3 -0.5
stress R2A with Dimethyl Sulfoxide 5 vol% +0.1 -0.5 -0.7 -0.0 -0.0
carbon source L-Malic (C) -0.2 -0.3 -0.9 +0.2 +0.0
carbon source Carbon source Phenylacetic 2.5 mM -0.3 -0.4 -0.6 +0.2 -0.1
carbon source Carbon source D,L-Lactate 10 mM -0.2 -0.6 -0.3 +0.3 -0.3
carbon source Hexanoic (C) -0.3 -0.3 -0.8 +0.1 +0.4
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.1 -0.6 +0.4 -0.2 -0.3
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.1 -0.4 +0.3 -0.3 -0.5
carbon source L-Leucine (C) -0.0 -0.3 -0.7 +0.3 +0.3
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.2 -0.3 +0.6 -0.0 -0.4
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.4 -0.6 +0.4 -0.3 +0.2
lb LB +0.5 +0.3 -0.1 +0.6 -1.0
nitrogen source L-Citrulline (N) -0.3 -0.2 +0.4 -0.1 +0.5
carbon source L-Asparagine (C) +0.2 +0.5 -0.5 -0.0 +0.4
stress R2A with Nickel (II) chloride 0.25 mM -0.2 +0.4 +0.2 -0.2 +0.4
stress R2A with Vancomycin 0.5 mg/ml +0.3 +0.4 +0.2 +0.4 -0.1
stress R2A with Sisomicin 0.035 mg/ml +0.6 +0.4 -0.7 +0.2 +0.7
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