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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS03440 and RR42_RS03445 are separated by 179 nucleotides
RR42_RS03445 and RR42_RS03450 are separated by 360 nucleotides
RR42_RS03450 and RR42_RS03455 are separated by 12 nucleotides
RR42_RS03455 and RR42_RS03460 overlap by 20 nucleotides
RR42_RS03440: RR42_RS03440 - 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 764,829 to 765,587
_RS03440
RR42_RS03445: RR42_RS03445 - adenylate kinase, at 765,767 to 766,432
_RS03445
RR42_RS03450: RR42_RS03450 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 766,793 to 767,602
_RS03450
RR42_RS03455: RR42_RS03455 - hypothetical protein, at 767,615 to 767,803
_RS03455
RR42_RS03460: RR42_RS03460 - tetraacyldisaccharide 4'-kinase, at 767,784 to 768,893
_RS03460
Group
Condition
RR42
_RS03440
RR42
_RS03445
RR42
_RS03450
RR42
_RS03455
RR42
_RS03460
stress
R2A with D-Cycloserine 0.01 mg/ml
-0.8
N.D.
N.D.
N.D.
N.D.
lb
LB
-0.8
N.D.
N.D.
N.D.
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
propionate (C)
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.6
N.D.
N.D.
N.D.
N.D.
r2a
R2A
-0.6
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
L-Leucine (C)
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
Azelaic (C)
-0.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with A22 0.01 mg/ml
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with Cisplatin 0.001 mg/ml
-0.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with nitrate 200 mM
-0.4
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Tryptophan (N)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
L-Tryptophan (C)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
butyrate (C)
-0.4
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Valine (N)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Chlorite 4 mM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
propionate (C)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Chloride 300 mM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
L-Phenylalanine (C)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Dodecandioic (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
+0.5
N.D.
N.D.
N.D.
N.D.
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