Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS03405 and RR42_RS03410 are separated by 16 nucleotidesRR42_RS03410 and RR42_RS03415 overlap by 7 nucleotidesRR42_RS03415 and RR42_RS03420 are separated by 70 nucleotidesRR42_RS03420 and RR42_RS03425 are separated by 95 nucleotides RR42_RS03405: RR42_RS03405 - epoxyqueuosine reductase, at 757,589 to 758,809 _RS03405 RR42_RS03410: RR42_RS03410 - ATPase, at 758,826 to 759,338 _RS03410 RR42_RS03415: RR42_RS03415 - N-acetylmuramoyl-L-alanine amidase, at 759,332 to 760,837 _RS03415 RR42_RS03420: RR42_RS03420 - bile acid:sodium symporter, at 760,908 to 761,930 _RS03420 RR42_RS03425: RR42_RS03425 - LysR family transcriptional regulator, at 762,026 to 762,934 _RS03425
Group Condition RR42_RS03405 RR42_RS03410 RR42_RS03415 RR42_RS03420 RR42_RS03425
nitrogen source L-Lysine (N) +0.3 N.D. -3.0 +0.0 +0.0
stress R2A with Bacitracin 0.5 mg/ml -0.2 N.D. -2.0 -0.1 -0.2
stress R2A with Chloride 300 mM -0.4 N.D. -2.1 +0.0 -0.1
stress R2A with Vancomycin 0.5 mg/ml -0.0 N.D. -2.2 +0.2 +0.1
lb LB -0.0 N.D. -1.4 -0.4 +0.1
stress R2A with nitrate 200 mM -0.2 N.D. -1.2 -0.0 -0.1
nitrogen source D-Alanine (N) +0.1 N.D. -1.5 -0.1 -0.0
stress R2A with Zinc 0.1 mM +0.4 N.D. -1.8 -0.2 +0.1
stress R2A with Paraquat dichloride 0.064 mg/ml +0.1 N.D. -1.0 -0.7 +0.2
temperature R2A 37C -0.3 N.D. -1.2 +0.2 -0.1
stress R2A with Sisomicin 0.035 mg/ml -0.1 N.D. -1.2 -0.2 +0.1
carbon source Hexanoic (C) -0.1 N.D. -1.0 -0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 N.D. -0.7 -0.3 -0.4
stress R2A with Nickel (II) chloride 0.5 mM -0.4 N.D. -1.1 +0.1 +0.2
stress R2A with Nickel (II) chloride 0.25 mM -0.3 N.D. -1.2 +0.3 +0.0
carbon source Trisodium citrate (C) +0.2 N.D. -1.2 -0.1 -0.1
nitrogen source Glycine (N) -0.6 N.D. -0.6 -0.1 +0.2
stress R2A with Vancomycin 0.5 mg/ml -0.5 N.D. -0.9 +0.2 +0.0
stress R2A with Cobalt chloride 0.3 mM +0.1 N.D. -1.4 +0.1 +0.1
temperature R2A 23C -0.6 N.D. -0.4 +0.2 -0.3
carbon source a-Ketoglutaric (C) +0.3 N.D. -1.2 -0.1 -0.0
stress R2A with Nickel (II) chloride 0.35 mM +0.3 N.D. -1.3 +0.0 -0.0
carbon source succinate (C) +0.2 N.D. -0.8 +0.0 -0.3
stress R2A with nitrate 150 mM +0.6 N.D. -1.6 +0.1 +0.1
carbon source L-Proline (C) +0.2 N.D. -0.7 -0.2 +0.1
stress R2A with Chlorite 4 mM +0.9 N.D. -0.2 +0.2 -0.3
stress R2A with D-Cycloserine 0.5 mg/ml +0.3 N.D. +1.4 -0.2 -0.3
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.2 N.D. +1.6 -0.3 -0.0
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +0.3 N.D. +1.0 +0.0 +0.1
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.4 N.D. +1.3 +0.2 +0.2
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