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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS02190 and RR42_RS02195 are separated by 2 nucleotides
RR42_RS02195 and RR42_RS02200 are separated by 41 nucleotides
RR42_RS02200 and RR42_RS02205 are separated by 65 nucleotides
RR42_RS02205 and RR42_RS02210 overlap by 4 nucleotides
RR42_RS02190: RR42_RS02190 - fumarate hydrolyase, at 487,601 to 488,215
_RS02190
RR42_RS02195: RR42_RS02195 - fumarate hydratase, at 488,218 to 489,093
_RS02195
RR42_RS02200: RR42_RS02200 - LacI family transcriptional regulator, at 489,135 to 490,130
_RS02200
RR42_RS02205: RR42_RS02205 - succinate dehydrogenase, at 490,196 to 490,549
_RS02205
RR42_RS02210: RR42_RS02210 - succinate dehydrogenase, at 490,546 to 490,899
_RS02210
Group
Condition
RR42
_RS02190
RR42
_RS02195
RR42
_RS02200
RR42
_RS02205
RR42
_RS02210
stress
R2A with sodium fluoride 100 mM
+0.0
-0.0
-0.1
-1.4
-0.8
carbon source
D-Lactate (C)
-0.6
+0.0
-0.2
-1.2
-0.2
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
-0.1
+0.2
-0.3
-1.0
-0.8
nitrogen source
L-Tryptophan (N)
-0.1
-0.0
+0.2
+0.3
-2.3
carbon source
adipate (C)
-0.2
+0.3
+0.1
-1.5
-0.7
lb
LB
+0.2
-0.1
-1.1
-0.1
-0.7
stress
R2A with Nickel (II) chloride 0.35 mM
-0.2
+0.1
+0.1
-0.6
-1.3
carbon source
Pimelic (C)
+0.1
+0.1
+0.4
-2.1
+0.0
carbon source
Valeric (C)
-0.1
+0.2
+0.3
-0.1
-1.8
nitrogen source
L-Leucine (N)
+0.1
+0.3
+0.0
-0.9
-1.0
carbon source
Heptanoic (C)
-0.4
-0.1
+0.0
+0.7
-1.6
nitrogen source
L-Glutamine (N)
-0.1
-0.4
-0.0
-1.1
+0.4
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.9
+0.5
+0.0
-0.6
-0.3
stress
R2A with Lomefloxacin 0.001 mM
+0.2
+0.5
-0.3
+0.5
-2.1
carbon source
D-Fructose (C)
-0.3
-0.1
-0.1
+0.5
-1.2
stress
R2A with Cobalt chloride 0.5 mM
+0.5
-0.3
+0.4
-1.3
-0.5
carbon source
Hexanoic (C)
-0.1
+0.2
+0.4
+0.5
-1.9
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.5
-0.3
-0.3
+0.7
-0.4
nitrogen source
L-Leucine (N)
-0.1
-0.2
-0.3
-0.9
+0.8
stress
R2A with Lomefloxacin 0.00075 mM
+0.1
+0.2
-1.1
+0.8
-0.5
stress
R2A with copper (II) chloride 0.25 mM
-0.2
+0.3
-0.2
-1.2
+1.1
nitrogen source
L-Asparagine (N)
-0.2
+0.3
-0.4
+0.7
-0.5
stress
R2A with Vancomycin 0.5 mg/ml
+0.2
+0.2
-0.2
-0.9
+0.7
carbon source
Protocatechuic Acid (C)
+0.3
+0.6
+0.1
+0.3
-1.3
stress
R2A with A22 0.01 mg/ml
-0.2
-0.1
+0.0
-0.9
+1.2
carbon source
L-Histidine (C)
-0.0
-0.3
+0.2
-0.4
+1.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.2
+0.3
-0.4
+0.7
+0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.3
+0.5
+0.3
+1.2
-0.9
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.3
-0.1
+0.1
-0.0
+2.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.1
+0.2
-0.3
+0.8
+1.7
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RR42_RS02200
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