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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS02110 and RR42_RS02115 are separated by 38 nucleotides
RR42_RS02115 and RR42_RS02120 are separated by 68 nucleotides
RR42_RS02120 and RR42_RS02125 are separated by 161 nucleotides
RR42_RS02125 and RR42_RS02130 are separated by 270 nucleotides
RR42_RS02110: RR42_RS02110 - potassium transporter, at 468,117 to 470,096
_RS02110
RR42_RS02115: RR42_RS02115 - arylsulfate sulfotransferase, at 470,135 to 470,518
_RS02115
RR42_RS02120: RR42_RS02120 - glutamine amidotransferase, at 470,587 to 471,165
_RS02120
RR42_RS02125: RR42_RS02125 - adenine phosphoribosyltransferase, at 471,327 to 471,899
_RS02125
RR42_RS02130: RR42_RS02130 - membrane protein, at 472,170 to 473,855
_RS02130
Group
Condition
RR42
_RS02110
RR42
_RS02115
RR42
_RS02120
RR42
_RS02125
RR42
_RS02130
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
-1.0
-0.4
-0.6
+0.7
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.2
-0.7
-0.2
-0.6
+0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.4
-0.6
-0.9
+0.1
+0.7
carbon source
Azelaic (C)
+0.4
-0.4
-0.0
-0.7
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.0
-0.5
-1.1
-0.2
+1.2
carbon source
Heptanoic (C)
+0.3
-0.1
-0.3
-0.9
+0.4
stress
R2A with Nickel (II) chloride 0.5 mM
+0.0
-0.2
-0.2
+0.5
-0.7
stress
R2A with Vancomycin 0.5 mg/ml
+0.5
-0.2
-0.3
-0.1
-0.2
carbon source
Disodium Glutarate (C)
+0.2
-0.5
+0.1
-0.3
+0.2
carbon source
adipate (C)
+0.5
-0.7
-0.0
-0.3
+0.3
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+0.1
-0.2
-0.1
+0.4
-0.4
carbon source
Azelaic (C)
+0.2
-0.4
+0.2
-0.5
+0.3
stress
R2A with Cobalt chloride 0.5 mM
-0.2
+0.4
+0.0
+0.2
-0.5
carbon source
Heptanoic (C)
+0.4
-0.4
-0.0
-0.2
+0.3
carbon source
D,L-Lactate (C)
+0.4
-0.3
+0.1
-0.3
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.5
-0.0
+0.3
+0.6
carbon source
Hexanoic (C)
+0.4
-0.1
+0.3
-0.4
-0.0
carbon source
succinate (C)
+0.5
-0.2
+0.2
-0.4
+0.2
carbon source
Pimelic (C)
+0.5
-0.4
+0.1
-0.4
+0.5
carbon source
succinate (C)
+0.6
-0.1
+0.2
-0.6
+0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.2
+0.5
-0.3
-0.2
+0.5
carbon source
Octanoic (C)
+0.6
-0.4
+0.2
-0.4
+0.3
carbon source
propionate (C)
+0.6
+0.1
+0.3
-0.3
-0.2
carbon source
Hexanoic (C)
+0.6
-0.1
+0.2
-0.4
+0.1
carbon source
D-Gluconic Acid (C)
-0.4
+0.4
+0.5
+0.4
-0.4
carbon source
Ethanol (C)
+0.3
-0.4
+0.1
+0.3
+0.4
carbon source
Pimelic (C)
+0.5
-0.3
+0.3
-0.1
+0.1
carbon source
Protocatechuic Acid (C)
+0.5
+0.3
+0.1
-0.4
+0.2
carbon source
Protocatechuic Acid (C)
+0.8
-0.1
+0.1
-0.2
+0.5
stress
R2A with Zinc 0.1 mM
+0.1
+0.3
+0.4
+0.5
+0.2
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