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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS02070 and RR42_RS02075 are separated by 35 nucleotides
RR42_RS02075 and RR42_RS02080 are separated by 384 nucleotides
RR42_RS02080 and RR42_RS02085 are separated by 49 nucleotides
RR42_RS02085 and RR42_RS02090 are separated by 138 nucleotides
RR42_RS02070: RR42_RS02070 - HPr kinase, at 460,970 to 461,941
_RS02070
RR42_RS02075: RR42_RS02075 - PTS sugar transporter subunit IIA, at 461,977 to 462,432
_RS02075
RR42_RS02080: RR42_RS02080 - ribosome hibernation promoting factor, at 462,817 to 463,167
_RS02080
RR42_RS02085: RR42_RS02085 - RNA polymerase subunit sigma-54, at 463,217 to 464,692
_RS02085
RR42_RS02090: RR42_RS02090 - sugar ABC transporter ATP-binding protein, at 464,831 to 465,616
_RS02090
Group
Condition
RR42
_RS02070
RR42
_RS02075
RR42
_RS02080
RR42
_RS02085
RR42
_RS02090
carbon source
Heptanoic (C)
N.D.
N.D.
-0.0
-3.8
N.D.
nitrogen source
nitrite (N)
N.D.
N.D.
-0.4
-3.3
N.D.
nitrogen source
L-Citrulline (N)
N.D.
N.D.
-0.0
-3.6
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
-0.1
-3.5
N.D.
nitrogen source
L-Lysine (N)
N.D.
N.D.
+0.2
-3.8
N.D.
carbon source
Ethanol (C)
N.D.
N.D.
+0.2
-3.8
N.D.
nitrogen source
nitrate (N)
N.D.
N.D.
+0.1
-3.7
N.D.
nitrogen source
L-Valine (N)
N.D.
N.D.
-0.2
-3.3
N.D.
carbon source
Ethanol (C)
N.D.
N.D.
+0.3
-3.6
N.D.
nitrogen source
D-Alanine (N)
N.D.
N.D.
+0.1
-3.4
N.D.
nitrogen source
L-Serine (N)
N.D.
N.D.
-0.2
-3.1
N.D.
carbon source
propionate (C)
N.D.
N.D.
+0.3
-3.5
N.D.
nitrogen source
D-Alanine (N)
N.D.
N.D.
+0.3
-3.4
N.D.
carbon source
Heptanoic (C)
N.D.
N.D.
+0.0
-3.1
N.D.
nitrogen source
L-Serine (N)
N.D.
N.D.
+0.0
-3.0
N.D.
carbon source
propionate (C)
N.D.
N.D.
+0.1
-3.1
N.D.
carbon source
Valeric (C)
N.D.
N.D.
-0.0
-2.9
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
+0.1
-3.0
N.D.
nitrogen source
L-Valine (N)
N.D.
N.D.
+0.1
-2.9
N.D.
carbon source
propionate (C)
N.D.
N.D.
+0.2
-3.0
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
-0.0
-2.7
N.D.
carbon source
Valeric (C)
N.D.
N.D.
+0.1
-2.6
N.D.
nitrogen source
Glucuronamide (N)
N.D.
N.D.
-0.3
-2.2
N.D.
carbon source
succinate (C)
N.D.
N.D.
+0.1
-2.6
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
+0.2
-2.7
N.D.
carbon source
L-Histidine (C)
N.D.
N.D.
+0.0
-2.4
N.D.
carbon source
succinate (C)
N.D.
N.D.
+0.3
-2.2
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
N.D.
+1.1
+1.5
N.D.
carbon source
adipate (C)
N.D.
N.D.
+1.7
+1.0
N.D.
stress
R2A with Nickel (II) chloride 0.5 mM
N.D.
N.D.
+0.1
+2.6
N.D.
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