Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS02020 and RR42_RS02025 are separated by 59 nucleotidesRR42_RS02025 and RR42_RS02030 overlap by 4 nucleotidesRR42_RS02030 and RR42_RS02035 are separated by 119 nucleotidesRR42_RS02035 and RR42_RS02040 are separated by 140 nucleotides RR42_RS02020: RR42_RS02020 - tRNA-Gln, at 450,515 to 450,591 _RS02020 RR42_RS02025: RR42_RS02025 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, at 450,651 to 451,529 _RS02025 RR42_RS02030: RR42_RS02030 - membrane protein, at 451,526 to 452,146 _RS02030 RR42_RS02035: RR42_RS02035 - hypothetical protein, at 452,266 to 454,149 _RS02035 RR42_RS02040: RR42_RS02040 - formamidopyrimidine-DNA glycosylase, at 454,290 to 455,171 _RS02040
Group Condition RR42_RS02020 RR42_RS02025 RR42_RS02030 RR42_RS02035 RR42_RS02040
stress R2A with Nickel (II) chloride 0.5 mM N.D. N.D. -7.3 +0.2 -0.2
stress R2A with Vancomycin 0.5 mg/ml N.D. N.D. -3.0 -0.6 +0.0
stress R2A with Nickel (II) chloride 0.35 mM N.D. N.D. -1.9 -0.1 -0.1
stress R2A with Nickel (II) chloride 0.25 mM N.D. N.D. -1.1 -0.6 -0.0
stress R2A with Doxycycline hyclate 0.0001 mg/ml N.D. N.D. +0.4 -2.2 +0.2
carbon source Octanoic (C) N.D. N.D. -0.4 -0.7 -0.3
stress R2A with Polymyxin B sulfate 0.005 mg/ml N.D. N.D. +0.0 -1.5 +0.0
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate N.D. N.D. -1.3 -0.1 -0.0
stress R2A with Cobalt chloride 0.5 mM N.D. N.D. -0.9 -0.4 -0.0
carbon source Heptanoic (C) N.D. N.D. -0.4 -1.0 +0.0
stress R2A with Lomefloxacin 0.001 mM N.D. N.D. -0.7 -0.6 +0.1
carbon source Protocatechuic Acid (C) N.D. N.D. -0.7 -0.6 +0.1
stress R2A with Lomefloxacin 0.00075 mM N.D. N.D. -0.8 -0.3 +0.3
stress R2A with copper (II) chloride 0.25 mM N.D. N.D. -1.0 +0.2 +0.3
carbon source succinate (C) N.D. N.D. +0.6 -0.4 -0.2
stress R2A with Zinc 0.1 mM N.D. N.D. +0.9 -1.1 +0.2
nitrogen source L-Glutamine (N) N.D. N.D. +0.8 -0.6 +0.0
nitrogen source L-Leucine (N) N.D. N.D. +0.6 -0.4 +0.3
carbon source L-Histidine (C) N.D. N.D. +0.9 -0.2 -0.1
nitrogen source L-Leucine (N) N.D. N.D. +0.9 -0.4 +0.0
nitrogen source L-Isoleucine (N) N.D. N.D. +0.9 -0.4 +0.1
stress R2A with Cisplatin 0.001 mg/ml N.D. N.D. +0.9 -0.2 +0.2
carbon source Carbon source D,L-Lactate 10 mM N.D. N.D. +1.2 -0.3 -0.0
carbon source L-Malic (C) N.D. N.D. +0.9 -0.2 +0.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. N.D. +0.7 +0.5 -0.1
carbon source L-Lactate (C) N.D. N.D. +1.1 -0.1 +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM N.D. N.D. +1.0 +0.1 +0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL N.D. N.D. +1.2 +0.1 -0.0
nitrogen source D-Alanine (N) N.D. N.D. +0.8 +0.4 +0.3
carbon source Ethanol (C) N.D. N.D. +1.5 -0.0 +0.0
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