Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS01810 and RR42_RS01815 are separated by 15 nucleotides
RR42_RS01815 and RR42_RS01820 are separated by 62 nucleotides
RR42_RS01820 and RR42_RS01825 are separated by 161 nucleotides
RR42_RS01825 and RR42_RS01830 are separated by 140 nucleotides
RR42_RS01810: RR42_RS01810 - tRNA 2-selenouridine synthase, at 411,153 to 412,277
_RS01810
RR42_RS01815: RR42_RS01815 - molybdopterin biosynthesis protein MoeB, at 412,293 to 413,060
_RS01815
RR42_RS01820: RR42_RS01820 - peptidase S41, at 413,123 to 414,712
_RS01820
RR42_RS01825: RR42_RS01825 - phosphoglyceromutase, at 414,874 to 415,620
_RS01825
RR42_RS01830: RR42_RS01830 - sulfurtransferase, at 415,761 to 416,174
_RS01830
Group
Condition
RR42
_RS01810
RR42
_RS01815
RR42
_RS01820
RR42
_RS01825
RR42
_RS01830
stress
R2A with Nickel (II) chloride 0.5 mM
+0.0
N.D.
-3.4
N.D.
-2.2
stress
R2A with copper (II) chloride 0.25 mM
-0.1
N.D.
-1.5
N.D.
-3.5
stress
R2A with Cobalt chloride 0.5 mM
-0.1
N.D.
-3.3
N.D.
-0.7
nitrogen source
D-Alanine (N)
+0.0
N.D.
-1.7
N.D.
-1.5
stress
R2A with nitrate 150 mM
-0.1
N.D.
-1.4
N.D.
-1.4
nitrogen source
Glycine (N)
+0.1
N.D.
-0.9
N.D.
-2.0
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.1
N.D.
-1.7
N.D.
-0.7
stress
R2A with A22 0.01 mg/ml
+0.1
N.D.
-0.9
N.D.
-1.5
stress
R2A with Vancomycin 0.5 mg/ml
-0.0
N.D.
-0.4
N.D.
-1.9
stress
R2A with Nickel (II) chloride 0.25 mM
-0.1
N.D.
-0.8
N.D.
-1.3
stress
R2A with nitrate 200 mM
+0.0
N.D.
-1.8
N.D.
-0.4
nitrogen source
L-Glutamine (N)
-0.0
N.D.
-1.4
N.D.
-0.7
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.1
N.D.
-3.6
N.D.
+1.6
stress
R2A with Cobalt chloride 0.3 mM
-0.1
N.D.
-2.0
N.D.
+0.1
stress
R2A with Bacitracin 0.5 mg/ml
+0.1
N.D.
-1.2
N.D.
-1.0
stress
R2A with Lomefloxacin 0.001 mM
-0.3
N.D.
-2.2
N.D.
+0.5
carbon source
Dodecandioic (C)
+0.1
N.D.
-1.3
N.D.
-0.7
carbon source
Pimelic (C)
+0.2
N.D.
-0.2
N.D.
-1.9
carbon source
Pimelic (C)
+0.1
N.D.
+0.3
N.D.
-2.2
stress
R2A with Lomefloxacin 0.00075 mM
+0.0
N.D.
-2.4
N.D.
+1.0
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.0
N.D.
-2.6
N.D.
+1.5
stress
R2A with Chlorite 4 mM
-0.2
N.D.
-1.2
N.D.
+0.8
carbon source
adipate (C)
+0.3
N.D.
+0.9
N.D.
-1.7
carbon source
Protocatechuic Acid (C)
+0.2
N.D.
-1.4
N.D.
+0.9
carbon source
adipate (C)
+0.1
N.D.
+1.2
N.D.
-1.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.1
N.D.
-1.7
N.D.
+2.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
N.D.
-0.3
N.D.
+1.8
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
N.D.
-0.3
N.D.
+2.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.3
N.D.
-0.5
N.D.
+2.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
N.D.
-0.0
N.D.
+2.3
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