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Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS01475 and RR42_RS01480 are separated by 1 nucleotides
RR42_RS01480 and RR42_RS01485 are separated by 43 nucleotides
RR42_RS01485 and RR42_RS01490 are separated by 42 nucleotides
RR42_RS01490 and RR42_RS01495 are separated by 17 nucleotides
RR42_RS01475: RR42_RS01475 - hypothetical protein, at 334,081 to 334,401
_RS01475
RR42_RS01480: RR42_RS01480 - hypothetical protein, at 334,403 to 335,668
_RS01480
RR42_RS01485: RR42_RS01485 - phosphonate transporter, at 335,712 to 336,077
_RS01485
RR42_RS01490: RR42_RS01490 - histidine kinase, at 336,120 to 337,553
_RS01490
RR42_RS01495: RR42_RS01495 - diguanylate cyclase, at 337,571 to 339,352
_RS01495
Group
Condition
RR42
_RS01475
RR42
_RS01480
RR42
_RS01485
RR42
_RS01490
RR42
_RS01495
lb
LB
+0.0
-0.2
-6.1
-0.4
-0.1
stress
R2A with Cobalt chloride 0.5 mM
-0.2
+0.2
-3.7
+0.3
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
-0.3
+0.0
-2.1
-0.2
+0.1
carbon source
D-Fructose (C)
-0.2
-0.0
-1.4
-0.2
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.2
-0.2
-2.3
+0.0
+0.3
stress
R2A with Vancomycin 0.5 mg/ml
-0.1
+0.0
-1.9
-0.0
+0.0
carbon source
a-Ketoglutaric (C)
-0.1
-0.1
-1.5
-0.2
+0.1
carbon source
L-Glutamine (C)
-0.1
+0.1
-1.4
-0.2
+0.0
carbon source
D,L-Lactate (C)
+0.0
+0.1
-1.1
-0.3
-0.2
carbon source
L-Phenylalanine (C)
+0.2
+0.0
-1.2
-0.2
-0.2
stress
R2A with Nickel (II) chloride 0.25 mM
+0.1
-0.3
-0.8
+0.0
-0.0
nitrogen source
L-Glutamine (N)
+0.5
+0.0
-1.4
-0.1
+0.0
nitrogen source
Glucuronamide (N)
+0.1
+0.1
-1.1
+0.0
+0.1
stress
R2A with Lomefloxacin 0.001 mM
+0.1
-0.2
-0.6
-0.2
+0.2
stress
R2A with Sisomicin 0.035 mg/ml
+0.3
-0.2
-0.9
+0.2
-0.1
carbon source
Carbon source Phenylacetic 2.5 mM
+0.2
+0.2
-1.1
+0.1
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.3
+0.2
-1.3
+0.1
+0.4
stress
R2A with copper (II) chloride 0.25 mM
-0.0
-0.1
-0.6
+0.6
+0.1
carbon source
Protocatechuic Acid (C)
-0.4
-0.3
+0.9
+0.1
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.3
+0.3
-0.4
+0.2
-0.2
carbon source
Azelaic (C)
+0.0
-0.2
+1.0
-0.3
-0.1
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
-0.2
-0.1
+1.3
-0.1
-0.1
carbon source
Valeric (C)
-0.2
-0.1
+0.8
-0.0
+0.3
carbon source
Dodecandioic (C)
+0.1
+0.2
+0.6
-0.3
+0.3
nitrogen source
D-Alanine (N)
+0.4
+0.2
+0.6
-0.1
-0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.2
+0.4
+0.8
+0.0
-0.4
stress
R2A with Chloride 300 mM
-0.0
+0.0
+1.1
+0.2
-0.1
nitrogen source
L-Isoleucine (N)
+0.3
+0.0
+0.7
+0.0
+0.2
carbon source
Heptanoic (C)
+0.2
+0.1
+0.5
+0.3
+0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.0
+0.1
+1.1
+0.3
+0.2
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