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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS01460 and RR42_RS01465 are separated by 644 nucleotides
RR42_RS01465 and RR42_RS01470 are separated by 56 nucleotides
RR42_RS01470 and RR42_RS01475 are separated by 224 nucleotides
RR42_RS01475 and RR42_RS01480 are separated by 1 nucleotides
RR42_RS01460: RR42_RS01460 - glucosamine--fructose-6-phosphate aminotransferase, at 328,636 to 330,474
_RS01460
RR42_RS01465: RR42_RS01465 - histidine kinase, at 331,119 to 333,086
_RS01465
RR42_RS01470: RR42_RS01470 - hypothetical protein, at 333,143 to 333,856
_RS01470
RR42_RS01475: RR42_RS01475 - hypothetical protein, at 334,081 to 334,401
_RS01475
RR42_RS01480: RR42_RS01480 - hypothetical protein, at 334,403 to 335,668
_RS01480
Group
Condition
RR42
_RS01460
RR42
_RS01465
RR42
_RS01470
RR42
_RS01475
RR42
_RS01480
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
N.D.
-0.2
-0.9
+0.1
+0.0
stress
R2A with Nickel (II) chloride 0.35 mM
N.D.
-0.3
-0.2
-0.3
+0.0
lb
LB
N.D.
+0.0
-0.6
+0.0
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
-0.1
-0.6
-0.1
+0.2
nitrogen source
D-Alanine (N)
N.D.
-0.1
-0.6
+0.1
+0.1
carbon source
a-Ketoglutaric (C)
N.D.
+0.1
-0.3
-0.4
+0.0
carbon source
Protocatechuic Acid (C)
N.D.
+0.2
-0.1
-0.4
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
N.D.
+0.2
-0.5
-0.2
-0.0
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
N.D.
+0.3
-0.8
+0.0
+0.1
carbon source
Dodecandioic (C)
N.D.
+0.0
-0.6
+0.1
+0.2
nitrogen source
L-Leucine (N)
N.D.
-0.0
-0.5
+0.3
+0.0
nitrogen source
L-Tryptophan (N)
N.D.
+0.1
-0.5
+0.2
+0.0
stress
R2A with Cisplatin 0.001 mg/ml
N.D.
-0.5
+0.2
+0.2
-0.1
carbon source
Carbon source Phenylacetic 2.5 mM
N.D.
+0.1
-0.2
-0.3
+0.3
carbon source
Heptanoic (C)
N.D.
+0.1
-0.4
+0.2
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
+0.4
-0.5
+0.0
+0.1
nitrogen source
L-Valine (N)
N.D.
+0.0
-0.4
+0.3
+0.1
stress
R2A with Sisomicin 0.035 mg/ml
N.D.
+0.1
-0.1
+0.3
-0.2
nitrogen source
L-Citrulline (N)
N.D.
+0.0
-0.3
+0.3
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
-0.0
-0.3
+0.3
+0.2
nitrogen source
L-Isoleucine (N)
N.D.
+0.2
-0.3
+0.3
+0.0
stress
R2A with Lomefloxacin 0.001 mM
N.D.
+0.0
+0.4
+0.1
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
N.D.
+0.2
+0.1
+0.2
-0.2
carbon source
Carbon source Phenylacetic 2.5 mM
N.D.
+0.1
-0.3
+0.2
+0.2
carbon source
propionate (C)
N.D.
-0.1
-0.2
+0.5
+0.1
stress
R2A with Nickel (II) chloride 0.5 mM
N.D.
+0.0
-0.3
+0.2
+0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
+0.0
-0.1
+0.3
+0.3
nitrogen source
D-Alanine (N)
N.D.
+0.2
-0.1
+0.4
+0.2
carbon source
L-Phenylalanine (C)
N.D.
+0.1
+0.4
+0.2
+0.0
nitrogen source
L-Glutamine (N)
N.D.
+0.3
+0.3
+0.5
+0.0
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RR42_RS01470
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