Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntRR42_RS00860 and RR42_RS00865 are separated by 85 nucleotidesRR42_RS00865 and RR42_RS00870 are separated by 72 nucleotidesRR42_RS00870 and RR42_RS00875 are separated by 161 nucleotidesRR42_RS00875 and RR42_RS00880 overlap by 4 nucleotides RR42_RS00860: RR42_RS00860 - MerR family transcriptional regulator, at 208,798 to 209,232 _RS00860 RR42_RS00865: RR42_RS00865 - phenylacetic acid degradation protein PaaI, at 209,318 to 209,776 _RS00865 RR42_RS00870: RR42_RS00870 - isovaleryl-CoA dehydrogenase, at 209,849 to 211,039 _RS00870 RR42_RS00875: RR42_RS00875 - isocitrate dehydrogenase, at 211,201 to 213,045 _RS00875 RR42_RS00880: RR42_RS00880 - carbonate dehydratase, at 213,042 to 213,713 _RS00880
Group Condition RR42_RS00860 RR42_RS00865 RR42_RS00870 RR42_RS00875 RR42_RS00880
carbon source Pimelic (C) -0.7 -0.1 N.D. -5.1 N.D.
carbon source Pimelic (C) -0.6 -0.1 N.D. -5.1 N.D.
carbon source Ethanol (C) -0.7 -0.0 N.D. -4.6 N.D.
carbon source Octanoic (C) +0.0 -0.1 N.D. -4.7 N.D.
carbon source Octanoic (C) +0.0 +0.2 N.D. -4.9 N.D.
carbon source Ethanol (C) -0.5 +0.2 N.D. -4.3 N.D.
carbon source Azelaic (C) -0.0 -0.1 N.D. -4.3 N.D.
carbon source Azelaic (C) -0.0 -0.2 N.D. -4.1 N.D.
carbon source Disodium Glutarate (C) -0.9 -0.1 N.D. -3.2 N.D.
carbon source L-Leucine (C) -0.7 +0.0 N.D. -3.5 N.D.
carbon source L-Proline (C) -1.4 -0.2 N.D. -2.4 N.D.
carbon source L-Leucine (C) -0.4 -0.1 N.D. -3.2 N.D.
carbon source Disodium Glutarate (C) -0.2 -0.1 N.D. -3.1 N.D.
carbon source butyrate (C) -0.3 +0.1 N.D. -2.9 N.D.
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -1.0 -0.1 N.D. -1.3 N.D.
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -1.9 +0.0 N.D. -0.3 N.D.
carbon source L-Tryptophan (C) -0.9 -0.1 N.D. -0.8 N.D.
carbon source a-Ketoglutaric (C) -0.1 -0.0 N.D. -1.5 N.D.
carbon source Suberic (C) -0.9 -0.0 N.D. -0.7 N.D.
carbon source a-Ketoglutaric (C) -0.2 +0.0 N.D. -1.4 N.D.
nitrogen source L-Leucine (N) -0.2 -0.1 N.D. -1.2 N.D.
carbon source L-Tryptophan (C) -0.6 +0.0 N.D. -0.8 N.D.
carbon source Protocatechuic Acid (C) -0.9 +0.2 N.D. -0.5 N.D.
carbon source Heptanoic (C) -1.0 +0.1 N.D. -0.3 N.D.
carbon source Dodecandioic (C) +0.2 -0.1 N.D. -1.1 N.D.
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.5 +0.0 N.D. -1.4 N.D.
carbon source Dodecandioic (C) +0.6 -0.1 N.D. -1.2 N.D.
nitrogen source L-Glutamine (N) -1.1 -0.1 N.D. +0.5 N.D.
carbon source Suberic (C) +0.3 +0.1 N.D. -1.1 N.D.
carbon source propionate (C) +1.2 -0.0 N.D. -0.1 N.D.
remove
RR42_RS00860
plot
remove
RR42_RS00865
plot
remove
RR42_RS00870
remove
RR42_RS00875
plot
remove
RR42_RS00880
plot