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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS00720 and RR42_RS00725 are separated by 69 nucleotides
RR42_RS00725 and RR42_RS00730 are separated by 69 nucleotides
RR42_RS00730 and RR42_RS00735 are separated by 265 nucleotides
RR42_RS00735 and RR42_RS00740 are separated by 66 nucleotides
RR42_RS00720: RR42_RS00720 - patatin, at 181,827 to 183,068
_RS00720
RR42_RS00725: RR42_RS00725 - hypothetical protein, at 183,138 to 184,046
_RS00725
RR42_RS00730: RR42_RS00730 - enoyl-CoA hydratase, at 184,116 to 184,934
_RS00730
RR42_RS00735: RR42_RS00735 - fumarylacetoacetate hydrolase, at 185,200 to 186,183
_RS00735
RR42_RS00740: RR42_RS00740 - ABC transporter substrate-binding protein, at 186,250 to 187,206
_RS00740
Group
Condition
RR42
_RS00720
RR42
_RS00725
RR42
_RS00730
RR42
_RS00735
RR42
_RS00740
nitrogen source
D-Alanine (N)
+0.1
-2.5
+0.0
-0.2
-0.1
temperature
R2A 23C
-0.7
-0.8
-0.4
-0.3
-0.4
nitrogen source
L-Serine (N)
+0.0
-1.7
-0.3
-0.3
-0.3
r2a
R2A
-0.6
-0.9
-0.3
-0.4
-0.1
nitrogen source
Glucuronamide (N)
+0.3
-1.7
-0.2
-0.5
+0.1
nitrogen source
L-Leucine (N)
-0.2
-1.3
-0.0
-0.2
-0.2
stress
R2A with Cisplatin 0.001 mg/ml
-0.4
-0.6
-0.1
+0.2
-0.6
nitrogen source
D-Alanine (N)
+0.1
-1.7
-0.0
-0.2
+0.3
nitrogen source
Glycine (N)
+0.3
-1.9
-0.0
-0.2
+0.3
nitrogen source
casaminos (N)
+0.0
-0.2
-0.4
-0.5
-0.4
carbon source
pyruvate (C)
-0.2
-1.1
+0.3
-0.1
-0.1
nitrogen source
L-Tryptophan (N)
-0.0
-1.6
+0.0
+0.0
+0.3
nitrogen source
L-Tryptophan (N)
+0.5
-1.4
-0.1
-0.1
-0.2
stress
R2A with nitrate 200 mM
-0.2
-0.6
-0.3
-0.1
+0.1
nitrogen source
L-Isoleucine (N)
+0.1
-0.8
-0.3
-0.2
+0.1
carbon source
L-Lactate (C)
+0.3
-1.2
-0.1
+0.1
-0.2
nitrogen source
L-Phenylalanine (N)
+0.1
-1.5
-0.2
+0.1
+0.5
nitrogen source
nitrate (N)
+0.1
-1.0
-0.0
-0.2
+0.2
carbon source
D,L-Lactate (C)
+0.1
-1.0
+0.2
-0.2
-0.0
nitrogen source
L-Valine (N)
+0.1
-1.0
-0.1
+0.0
+0.3
nitrogen source
L-Leucine (N)
+0.4
-1.0
+0.2
+0.1
-0.3
carbon source
Pimelic (C)
+0.2
-1.0
-0.1
+0.1
+0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.4
+0.2
+0.1
-0.3
-0.8
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
+0.8
+0.3
-0.2
-0.7
carbon source
Octanoic (C)
+0.3
-0.5
-0.0
+0.1
+0.6
lb
LB
-1.3
+0.9
+0.3
-0.3
+0.9
carbon source
Disodium Glutarate (C)
+0.3
-0.5
-0.0
+0.2
+0.7
carbon source
adipate (C)
-0.2
+0.8
-0.0
+0.3
+0.1
carbon source
adipate (C)
-0.1
+0.6
-0.2
+0.3
+0.4
stress
R2A with Cobalt chloride 0.3 mM
+0.3
+0.8
+0.4
+0.3
-0.0
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