Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS00605 and RR42_RS00610 are separated by 169 nucleotidesRR42_RS00610 and RR42_RS00615 are separated by 35 nucleotidesRR42_RS00615 and RR42_RS00620 overlap by 4 nucleotidesRR42_RS00620 and RR42_RS00625 are separated by 230 nucleotides RR42_RS00605: RR42_RS00605 - glutamyl-tRNA amidotransferase, at 158,952 to 160,412 _RS00605 RR42_RS00610: RR42_RS00610 - hypothetical protein, at 160,582 to 161,250 _RS00610 RR42_RS00615: RR42_RS00615 - recombinase XerC, at 161,286 to 162,410 _RS00615 RR42_RS00620: RR42_RS00620 - XRE family transcriptional regulator, at 162,407 to 163,366 _RS00620 RR42_RS00625: RR42_RS00625 - hypothetical protein, at 163,597 to 163,956 _RS00625
Group Condition RR42_RS00605 RR42_RS00610 RR42_RS00615 RR42_RS00620 RR42_RS00625
nitrogen source L-Lysine (N) N.D. -0.4 -0.3 -1.8 -2.9
carbon source Protocatechuic Acid (C) N.D. -0.2 -0.6 +0.2 -2.6
stress R2A with nitrate 200 mM N.D. -0.3 -0.2 -0.2 -2.2
nitrogen source L-Tryptophan (N) N.D. -1.0 -0.9 -0.6 -0.1
carbon source Carbon source D,L-Lactate 10 mM N.D. -0.3 -0.5 +0.1 -1.6
stress R2A with Dimethyl Sulfoxide 5 vol% N.D. -0.9 -0.8 -0.2 -0.4
nitrogen source L-Tryptophan (N) N.D. -0.7 -0.4 -0.3 -0.8
carbon source a-Ketoglutaric (C) N.D. -0.6 -0.6 -0.4 -0.7
carbon source Carbon source Phenylacetic 2.5 mM N.D. -0.7 -1.0 +0.2 -0.7
carbon source L-Tryptophan (C) N.D. -0.4 -0.7 -0.8 -0.3
nitrogen source D-Alanine (N) N.D. -0.9 -0.7 -0.1 -0.4
carbon source L-Histidine (C) N.D. -0.7 -1.2 -0.2 -0.0
carbon source Pimelic (C) N.D. -1.4 -0.1 +0.2 -0.8
stress R2A with D-Cycloserine 0.5 mg/ml N.D. -0.4 +0.0 -0.3 -1.4
nitrogen source casaminos (N) N.D. -0.5 -0.7 -0.3 -0.6
nitrogen source L-Valine (N) N.D. -0.9 -0.5 +0.3 -1.0
stress R2A with sodium fluoride 100 mM N.D. -0.9 -1.2 +0.1 +0.1
carbon source a-Ketoglutaric (C) N.D. -0.8 -0.6 +0.2 -0.5
carbon source L-Glutamine (C) N.D. -0.4 -0.7 +0.2 -0.8
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM N.D. -0.3 -0.7 +0.5 -0.6
carbon source adipate (C) N.D. -1.1 -0.3 -0.1 +0.6
nitrogen source Glucuronamide (N) N.D. -1.1 -0.7 +0.1 +0.8
lb LB N.D. -0.7 -1.3 +0.1 +1.0
stress R2A with Cobalt chloride 0.3 mM N.D. +0.2 -0.0 +0.4 -1.4
nitrogen source D-Alanine (N) N.D. -0.8 -0.5 -0.3 +0.9
nitrogen source L-Serine (N) N.D. -0.9 -0.4 -0.2 +1.0
nitrogen source L-Leucine (N) N.D. -0.7 -0.8 +0.3 +0.7
carbon source adipate (C) N.D. -1.3 +0.5 +0.1 +0.3
carbon source L-Lactate (C) N.D. -0.8 -0.4 -0.0 +0.9
carbon source D,L-Lactate (C) N.D. -0.8 -0.2 -0.0 +1.1
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