Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS00585 and RR42_RS00590 are separated by 95 nucleotidesRR42_RS00590 and RR42_RS00595 overlap by 4 nucleotidesRR42_RS00595 and RR42_RS00600 overlap by 4 nucleotidesRR42_RS00600 and RR42_RS00605 are separated by 106 nucleotides RR42_RS00585: RR42_RS00585 - glutamyl-tRNA amidotransferase, at 155,513 to 155,812 _RS00585 RR42_RS00590: RR42_RS00590 - glutamyl-tRNA amidotransferase, at 155,908 to 157,413 _RS00590 RR42_RS00595: RR42_RS00595 - lipoprotein, at 157,410 to 157,877 _RS00595 RR42_RS00600: RR42_RS00600 - DeoR family transcriptional regulator, at 157,874 to 158,845 _RS00600 RR42_RS00605: RR42_RS00605 - glutamyl-tRNA amidotransferase, at 158,952 to 160,412 _RS00605
Group Condition RR42_RS00585 RR42_RS00590 RR42_RS00595 RR42_RS00600 RR42_RS00605
r2a R2A N.D. N.D. -1.0 -1.9 N.D.
lb LB N.D. N.D. -0.9 -1.0 N.D.
stress R2A with Cobalt chloride 0.5 mM N.D. N.D. -0.2 -1.7 N.D.
stress R2A with D-Cycloserine 0.5 mg/ml N.D. N.D. -0.2 -1.3 N.D.
temperature R2A 23C N.D. N.D. -0.5 -0.9 N.D.
nitrogen source L-Valine (N) N.D. N.D. -0.4 -1.0 N.D.
stress R2A with Cephalothin 0.25 mg/ml N.D. N.D. -0.7 -0.6 N.D.
stress R2A with Lomefloxacin 0.00075 mM N.D. N.D. -0.5 -0.7 N.D.
temperature R2A 23C N.D. N.D. -0.2 -0.9 N.D.
carbon source adipate (C) N.D. N.D. +0.3 -1.1 N.D.
carbon source L-Histidine (C) N.D. N.D. +0.3 -1.0 N.D.
carbon source L-Proline (C) N.D. N.D. +0.2 -0.7 N.D.
carbon source Azelaic (C) N.D. N.D. +0.5 -0.6 N.D.
nitrogen source L-Citrulline (N) N.D. N.D. -0.6 +0.7 N.D.
stress R2A with Chlorite 4 mM N.D. N.D. -0.4 +0.7 N.D.
nitrogen source L-Tryptophan (N) N.D. N.D. -0.4 +0.7 N.D.
carbon source Carbon source Phenylacetic 2.5 mM N.D. N.D. -0.4 +0.7 N.D.
stress R2A with Chloride 300 mM N.D. N.D. -0.3 +0.8 N.D.
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM N.D. N.D. -0.4 +1.4 N.D.
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. N.D. +0.3 +0.7 N.D.
nitrogen source L-Isoleucine (N) N.D. N.D. -0.3 +1.3 N.D.
nitrogen source D-Alanine (N) N.D. N.D. +0.1 +0.9 N.D.
stress R2A with Cobalt chloride 0.3 mM N.D. N.D. +0.5 +0.5 N.D.
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate N.D. N.D. +0.0 +0.9 N.D.
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate N.D. N.D. +0.2 +1.0 N.D.
stress R2A with Nickel (II) chloride 0.35 mM N.D. N.D. +0.2 +1.1 N.D.
nitrogen source Glucuronamide (N) N.D. N.D. -0.3 +1.7 N.D.
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate N.D. N.D. +0.1 +1.3 N.D.
nitrogen source L-Valine (N) N.D. N.D. -0.1 +1.8 N.D.
nitrogen source Glycine (N) N.D. N.D. +0.0 +1.9 N.D.
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