Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS00010 and RR42_RS00015 are separated by 227 nucleotidesRR42_RS00015 and RR42_RS00020 are separated by 364 nucleotidesRR42_RS00020 and RR42_RS00025 are separated by 225 nucleotidesRR42_RS00025 and RR42_RS00030 are separated by 3 nucleotides RR42_RS00010: RR42_RS00010 - DNA polymerase III subunit beta, at 2,872 to 3,996 _RS00010 RR42_RS00015: RR42_RS00015 - DNA gyrase subunit B, at 4,224 to 6,761 _RS00015 RR42_RS00020: RR42_RS00020 - hypothetical protein, at 7,126 to 7,770 _RS00020 RR42_RS00025: RR42_RS00025 - GTPase, at 7,996 to 10,740 _RS00025 RR42_RS00030: RR42_RS00030 - hypothetical protein, at 10,744 to 13,032 _RS00030
Group Condition RR42_RS00010 RR42_RS00015 RR42_RS00020 RR42_RS00025 RR42_RS00030
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate N.D. N.D. -0.4 -0.1 -0.3
lb LB N.D. N.D. -0.7 +0.1 -0.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. N.D. -0.5 -0.1 -0.2
carbon source adipate (C) N.D. N.D. -0.4 -0.0 -0.2
stress R2A with Nickel (II) chloride 0.35 mM N.D. N.D. -0.4 -0.2 -0.0
stress R2A with Paraquat dichloride 0.064 mg/ml N.D. N.D. -0.4 -0.1 -0.1
carbon source Azelaic (C) N.D. N.D. -0.5 +0.0 -0.1
carbon source D-Lactate (C) N.D. N.D. -0.5 -0.1 -0.0
carbon source L-Leucine (C) N.D. N.D. -0.4 -0.1 -0.1
carbon source Azelaic (C) N.D. N.D. -0.5 +0.0 -0.0
stress R2A with Dimethyl Sulfoxide 5 vol% N.D. N.D. -0.7 +0.1 +0.1
carbon source Suberic (C) N.D. N.D. -0.6 +0.1 +0.0
carbon source a-Ketoglutaric (C) N.D. N.D. -0.4 +0.1 -0.0
stress R2A with Chloride 300 mM N.D. N.D. -0.5 +0.1 -0.0
carbon source Disodium Glutarate (C) N.D. N.D. -0.4 +0.2 +0.1
stress R2A with Sisomicin 0.035 mg/ml N.D. N.D. +0.4 -0.1 -0.1
stress R2A with Vancomycin 0.5 mg/ml N.D. N.D. +0.5 -0.0 -0.1
nitrogen source L-Tryptophan (N) N.D. N.D. +0.5 -0.0 -0.1
stress R2A with Zinc 0.1 mM N.D. N.D. +0.4 +0.1 +0.0
carbon source L-Asparagine (C) N.D. N.D. +0.2 +0.1 +0.2
nitrogen source L-Valine (N) N.D. N.D. +0.4 +0.1 -0.0
stress R2A with copper (II) chloride 0.25 mM N.D. N.D. +0.3 +0.1 +0.1
carbon source Carbon source Phenylacetic 2.5 mM N.D. N.D. +0.6 +0.1 -0.0
carbon source Protocatechuic Acid (C) N.D. N.D. +0.8 -0.0 -0.1
nitrogen source casaminos (N) N.D. N.D. +0.6 +0.0 +0.1
stress R2A with D-Cycloserine 0.5 mg/ml N.D. N.D. +0.6 +0.2 -0.0
stress R2A with Cisplatin 0.001 mg/ml N.D. N.D. +0.8 +0.1 +0.0
nitrogen source D-Alanine (N) N.D. N.D. +0.6 +0.2 +0.3
nitrogen source Glycine (N) N.D. N.D. +0.7 +0.3 +0.1
stress R2A with Lomefloxacin 0.001 mM N.D. N.D. +0.1 +0.5 +0.5
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